Parental gene:

ENSOPRG00000000983

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_3847:194793..195673(+)


>ENSOPRG00000000983
ATGGCCGAGCTGATCCAGAAGAAGCTGCAGGGAGAAGTGGAGAAGTACCAACAGCTACAGAAGGACTTGAGTAAATCCAT
GTCAGGGAGACAGAAGCTGGAAGCACAGTTAACAGAAAACAACATCGTGAAGGAGGAACTGGCTCTACTGGATGGATCCA
ACGTGGTCTTCAAACTTCTGGGCCCCGTGCTGGTTAAGCAGGAGCTGGGGGAGGCGCGGGCCACCGTGGGCAAGAGGCTG
GACTACATCACTGCTGAAATTAAGCGATACGAATCCCAGCTCCGGGACCTGGAGCGGCAGTCGGAGCAGCAGAGGGAAAC
CCTTGCCCAGCTGCAGCAGGAGTTCCAGCGGGCCCAGGCAGCAAAGGCAGGAGCACCTGGGAAAGCCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001576 possible_ortholog 2 retrogenes
retro_amel_221, retro_amel_824,
Bos taurus ENSBTAG00000010723 possible_ortholog 1 retrogene
retro_btau_619,
Canis familiaris ENSCAFG00000000956 possible_ortholog 2 retrogenes
retro_cfam_1749, retro_cfam_1981,
Cavia porcellus ENSCPOG00000019520 possible_ortholog 1 retrogene
retro_cpor_570,
Dasypus novemcinctus ENSDNOG00000011211 ortholog_one2many 2 retrogenes
retro_dnov_1317, retro_dnov_2064,
Dipodomys ordii ENSDORG00000013828 possible_ortholog 1 retrogene
retro_dord_453,
Felis catus ENSFCAG00000028199 possible_ortholog 1 retrogene
retro_fcat_1784,
Loxodonta africana ENSLAFG00000012967 ortholog_one2many 1 retrogene
retro_lafr_363,
Macropus eugenii ENSMEUG00000016778 ortholog_one2many 1 retrogene
retro_meug_1930,
Microcebus murinus ENSMICG00000000922 possible_ortholog 1 retrogene
retro_mmur_1520,
Mustela putorius furo ENSMPUG00000002364 possible_ortholog 1 retrogene
retro_mputfur_608,
Mus musculus ENSMUSG00000024309 possible_ortholog 1 retrogene
retro_mmus_1930,
Oryctolagus cuniculus ENSOCUG00000010559 possible_ortholog 1 retrogene
retro_ocun_711,
Otolemur garnettii ENSOGAG00000028341 possible_ortholog 4 retrogenes
retro_ogar_1185, retro_ogar_2023, retro_ogar_3508, retro_ogar_85,
Procavia capensis ENSPCAG00000006019 ortholog_one2many 1 retrogene
retro_pcap_226,
Pteropus vampyrus ENSPVAG00000001910 possible_ortholog 1 retrogene
retro_pvam_391,
Rattus norvegicus ENSRNOG00000000473 possible_ortholog 2 retrogenes
retro_rnor_2216, retro_rnor_2869,
Sorex araneus ENSSARG00000006330 possible_ortholog 2 retrogenes
retro_sara_338, retro_sara_453,
Tupaia belangeri ENSTBEG00000013280 possible_ortholog 1 retrogene
retro_tbel_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_12 100.00 100.00
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Download FASTA sequences of all ENSOPRG00000000983 retrocopies