Parental gene:

Rab5c, ENSRNOG00000018568

Aliases:None
Description:ras-related protein Rab-5C [Source:RefSeq peptide;Acc:NP_001099310]
Organism:Rat (Rattus norvegicus)
Coordinates:10:88416137..88439534(-)


>ENSRNOG00000018568
ATGGCGGGTCGAGGAGGTGCAGCACGACCCAATGGACCAGCTGCAGGCAACAAGATCTGTCAGTTTAAGCTGGTCCTCTT
GGGCGAGTCTGCAGTGGGCAAATCCAGCCTGGTCCTCCGCTTTGTCAAGGGGCAGTTCCATGAGTACCAGGAGAGCACAA
TTGGAGCGGCTTTCCTCACACAGACTGTCTGCTTAGACGACACAACGGTCAAGTTTGAGATCTGGGACACAGCTGGGCAA
GAGCGATATCACAGCCTGGCCCCGATGTACTATCGGGGGGCCCAAGCAGCCATTGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCTAAGAACTGGGTGAAGGAGTTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTAGCGGGTA
ACAAAGCAGACCTGGCCAGCAAGAGAGCCGTGGAGTTTCAGGAAGCACAAGCCTACGCAGATGACAACAGTTTGCTGTTC
ATGGAGACGTCCGCAAAGACTGCAATGAACGTGAATGAAATTTTCATGGCGATAGCTAAGAAGCTTCCCAAGAATGAGCC
CCAGAATGCAGCTGGTGCTCCAGGCCGAAACAGAGGTGTGGATCTGCAGGAGAGCAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 92 .39 RPM
SRP017611_kidney 157 .71 RPM
SRP017611_liver 54 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000472 ortholog_one2one 2 retrogenes
retro_cjac_189, retro_cjac_1948,
Cavia porcellus ENSCPOG00000011190 possible_ortholog 2 retrogenes
retro_cpor_333, retro_cpor_473,
Dipodomys ordii ENSDORG00000006819 ortholog_one2one 1 retrogene
retro_dord_428,
Macropus eugenii ENSMEUG00000005614 ortholog_one2many 1 retrogene
retro_meug_2118,
Monodelphis domestica ENSMODG00000014792 ortholog_one2many 1 retrogene
retro_mdom_1399,
Pongo abelii ENSPPYG00000008398 possible_ortholog 1 retrogene
retro_pabe_2664,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_73 91.48 80.09
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2. retro_rnor_393 87.04 100.00
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Download FASTA sequences of all ENSRNOG00000018568 retrocopies