Parental gene: | Rab5c, ENSRNOG00000018568 |
| Aliases: | None |
| Description: | ras-related protein Rab-5C [Source:RefSeq peptide;Acc:NP_001099310] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:88416137..88439534(-) |
>ENSRNOG00000018568
ATGGCGGGTCGAGGAGGTGCAGCACGACCCAATGGACCAGCTGCAGGCAACAAGATCTGTCAGTTTAAGCTGGTCCTCTT
GGGCGAGTCTGCAGTGGGCAAATCCAGCCTGGTCCTCCGCTTTGTCAAGGGGCAGTTCCATGAGTACCAGGAGAGCACAA
TTGGAGCGGCTTTCCTCACACAGACTGTCTGCTTAGACGACACAACGGTCAAGTTTGAGATCTGGGACACAGCTGGGCAA
GAGCGATATCACAGCCTGGCCCCGATGTACTATCGGGGGGCCCAAGCAGCCATTGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCTAAGAACTGGGTGAAGGAGTTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTAGCGGGTA
ACAAAGCAGACCTGGCCAGCAAGAGAGCCGTGGAGTTTCAGGAAGCACAAGCCTACGCAGATGACAACAGTTTGCTGTTC
ATGGAGACGTCCGCAAAGACTGCAATGAACGTGAATGAAATTTTCATGGCGATAGCTAAGAAGCTTCCCAAGAATGAGCC
CCAGAATGCAGCTGGTGCTCCAGGCCGAAACAGAGGTGTGGATCTGCAGGAGAGCAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA
ATGGCGGGTCGAGGAGGTGCAGCACGACCCAATGGACCAGCTGCAGGCAACAAGATCTGTCAGTTTAAGCTGGTCCTCTT
GGGCGAGTCTGCAGTGGGCAAATCCAGCCTGGTCCTCCGCTTTGTCAAGGGGCAGTTCCATGAGTACCAGGAGAGCACAA
TTGGAGCGGCTTTCCTCACACAGACTGTCTGCTTAGACGACACAACGGTCAAGTTTGAGATCTGGGACACAGCTGGGCAA
GAGCGATATCACAGCCTGGCCCCGATGTACTATCGGGGGGCCCAAGCAGCCATTGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCTAAGAACTGGGTGAAGGAGTTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTAGCGGGTA
ACAAAGCAGACCTGGCCAGCAAGAGAGCCGTGGAGTTTCAGGAAGCACAAGCCTACGCAGATGACAACAGTTTGCTGTTC
ATGGAGACGTCCGCAAAGACTGCAATGAACGTGAATGAAATTTTCATGGCGATAGCTAAGAAGCTTCCCAAGAATGAGCC
CCAGAATGCAGCTGGTGCTCCAGGCCGAAACAGAGGTGTGGATCTGCAGGAGAGCAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 54 .33 RPM |
| SRP017611_kidney | 157 .71 RPM |
| SRP017611_brain | 92 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000472 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011190 | possible_ortholog | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000006819 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005614 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014792 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008398 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_73 | 91.48 | 80.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_393 | 87.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000018568 retrocopies