Parental gene:

RAB5C, ENSMODG00000014792

Aliases:None
Description:RAB5C, member RAS oncogene family [Source:HGNC Symbol;Acc:9785]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:194268148..194314437(+)


>ENSMODG00000014792
ATGAAAATGAAGCAACTTTCCTCTAATCCAAGTTGGAGGCCTCCTCTCCCCATTAAGTGCCTCTGCACTCAGTATTGGCC
TCCCACTCCATCTCCCACGCTCACTGGTGCCACTGCTGTGGGAAGGGCCATGGCGGGTCGGGGAGGCGCAGCACGACCCA
ATGGACCAGCTGCTGGCAACAAAATCTGCCAATTTAAACTGGTCTTACTGGGGGAGTCAGCAGTGGGCAAGTCAAGCCTC
GTCCTACGCTTCGTCAAAGGACAGTTTCATGAATACCAGGAGAGCACAATTGGAGCGGCCTTCCTCACACAGACTGTCTG
CTTGGACGACACAACGGTCAAGTTTGAGATCTGGGACACAGCAGGACAAGAGCGGTATCACAGCCTGGCCCCCATGTACT
ATCGGGGAGCCCAGGCAGCCATCGTGGTCTATGACATCACAAATACAGATACATTTGCACGGGCTAAGAACTGGGTGAAA
GAACTGCAGCGGCAGGCTAGTCCCAACATAGTCATTGCACTTGCCGGCAACAAGGCTGACCTGGGCAGCAAGAGAGCTGT
GGATTTCCAAGAAGCACAAGCCTATGCAGAAGACAACAGCTTGCTGTTCATGGAGACATCAGCAAAGACAGCAATGAATG
TGAATGAAATTTTCATGGCAATAGCTAAGAAGCTGCCTAAGAATGAGCCCCAGAATGCACCTGGTGCCCCGGGCCGGAAT
CGGGGTGTAGACCTCCAGGAAAACAGCCCAACCAGCAGGAGCCAGTGCTGCAGCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006003 ortholog_one2one 1 retrogene
retro_amel_543,
Callithrix jacchus ENSCJAG00000000472 ortholog_one2many 2 retrogenes
retro_cjac_189, retro_cjac_1948,
Cavia porcellus ENSCPOG00000011190 ortholog_one2one 2 retrogenes
retro_cpor_333, retro_cpor_473,
Dipodomys ordii ENSDORG00000006819 ortholog_one2one 1 retrogene
retro_dord_428,
Gorilla gorilla ENSGGOG00000005472 ortholog_one2one 1 retrogene
retro_ggor_2182,
Macropus eugenii ENSMEUG00000005614 ortholog_one2one 1 retrogene
retro_meug_2118,
Macaca mulatta ENSMMUG00000014761 ortholog_one2one 1 retrogene
retro_mmul_2022,
Monodelphis domestica ENSMODG00000014793 within_species_paralog 2 retrogenes
retro_mdom_1219, retro_mdom_1993,
Monodelphis domestica ENSMODG00000021443 within_species_paralog 3 retrogenes
retro_mdom_1491, retro_mdom_1766, retro_mdom_994,
Otolemur garnettii ENSOGAG00000009456 ortholog_one2one 2 retrogenes
retro_ogar_2175, retro_ogar_985,
Pongo abelii ENSPPYG00000008398 ortholog_one2many 1 retrogene
retro_pabe_2664,
Pan troglodytes ENSPTRG00000009194 ortholog_one2one 1 retrogene
retro_ptro_2237,
Rattus norvegicus ENSRNOG00000018568 ortholog_one2many 2 retrogenes
retro_rnor_393, retro_rnor_73,
Tupaia belangeri ENSTBEG00000007092 ortholog_one2one 1 retrogene
retro_tbel_4668,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1399 74.41 81.47
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Download FASTA sequences of all ENSMODG00000014792 retrocopies