Parental gene: | ENSSHAG00000014470 |
| Aliases: | None |
| Description: | None |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL856819.1:1491822..1505838(-) |
>ENSSHAG00000014470
ATGGCTAACAGCGAGCGTACTTTTATTGCCATCAAGCCAGATGGGGTCCAGAGGGGCCTGGTTGGAAAGATTGTTAAGCG
CTTCGAGCAGAAAGGATTCCGTCTTGTTGGCTTAAAATTCATGCAAGCTTCTGAAGATCTTCTCAGAGAGCACTACATTG
ATCTGAAGGATCGCCCTTTCTATGGAGGCTTGGTGAAGTACATGCATTCTGGGCCTGTGGTAGCCATGGTCTGGGAGGGG
CTGAATGTGGTGAAGACAGGTCGTATGATGCTAGGAGAGACCAACCCGGCAGATTCCAAACCAGGGACTATCCGTGGGGA
CTTCTGTATTCAAGTTGGCAGGACCATGGCCAACACCGAGCGCACCTTCATTGCCATCAAGCCCGACGGCGTCCAGCGGG
GCCTGGTCGGGGACATCATCAAACGCTTTGAGCAGAAGGGATTCCGCCTCGTGGGCATGAAGTTCTTGAGGGCTTCAGAG
GAACATCTGAAACAGCACTATGCTGACCTGAAGGACAGGCCATTTTTCCCTGGACTTGTGAAGTACATGAATTCTGGGCC
TGTTGTAGCCATGGTCTGGGAGGGCTTGAATGTGGTGAAGACAGGCAGAGTGATGCTGGGGGAGACCAACCCAGCCGATT
CCAAGCCAGGCACTATTCGTGGGGATTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGCGATTCTGTAAAAAGT
GCTGAGAAGGAGATCAGCCTGTGGTTTAAGCCTGAAGAGCTAGTTGACTATAAATCTTGTGCTCATGACTGGGTCTATGA
ATAA
ATGGCTAACAGCGAGCGTACTTTTATTGCCATCAAGCCAGATGGGGTCCAGAGGGGCCTGGTTGGAAAGATTGTTAAGCG
CTTCGAGCAGAAAGGATTCCGTCTTGTTGGCTTAAAATTCATGCAAGCTTCTGAAGATCTTCTCAGAGAGCACTACATTG
ATCTGAAGGATCGCCCTTTCTATGGAGGCTTGGTGAAGTACATGCATTCTGGGCCTGTGGTAGCCATGGTCTGGGAGGGG
CTGAATGTGGTGAAGACAGGTCGTATGATGCTAGGAGAGACCAACCCGGCAGATTCCAAACCAGGGACTATCCGTGGGGA
CTTCTGTATTCAAGTTGGCAGGACCATGGCCAACACCGAGCGCACCTTCATTGCCATCAAGCCCGACGGCGTCCAGCGGG
GCCTGGTCGGGGACATCATCAAACGCTTTGAGCAGAAGGGATTCCGCCTCGTGGGCATGAAGTTCTTGAGGGCTTCAGAG
GAACATCTGAAACAGCACTATGCTGACCTGAAGGACAGGCCATTTTTCCCTGGACTTGTGAAGTACATGAATTCTGGGCC
TGTTGTAGCCATGGTCTGGGAGGGCTTGAATGTGGTGAAGACAGGCAGAGTGATGCTGGGGGAGACCAACCCAGCCGATT
CCAAGCCAGGCACTATTCGTGGGGATTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGCGATTCTGTAAAAAGT
GCTGAGAAGGAGATCAGCCTGTGGTTTAAGCCTGAAGAGCTAGTTGACTATAAATCTTGTGCTCATGACTGGGTCTATGA
ATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008022 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018395 | ortholog_one2one | 5 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000003783 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000011052 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016929 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000001940 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020857 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024946 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000025331 | ortholog_one2one | 9 retrogenes | |
| Rattus norvegicus | ENSRNOG00000002671 | ortholog_one2many | 8 retrogenes | |
| Sus scrofa | ENSSSCG00000017591 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013053 | ortholog_one2many | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_130 | 52.23 | 57.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_shar_554 | 60.14 | 50.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_shar_781 | 74.83 | 52.43 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSHAG00000014470 retrocopies