Parental gene:

ENSTBEG00000013053

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_69:273775..298178(+)


>ENSTBEG00000013053
ATGGCCAACTGTGAACGCACCTTCATTGCCATCAAGCCCGATGGGGTCCAGCGGGGCCTTGTGGGAGAGATCATCAAGCG
TTTTGAGCAGAAGGGATTCCTCCTTGTTGGTATGAAATTCATGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTGGGAGGGG
CTGAATGTTGTGAAGACAGGCCGAGTGATGCTCGGGGAGACCAACCCTGCGGACTCCAAACCTGGGACCATCCGAGGGGA
CTTTTGCATCCAAGTTGGCAGAGCCATGGCCAACCTCGAACGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCG
GCCTGGTGGGCGAGATCATCAAGCGCTTTGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTGCGGGCCTCAGAG
GAGCACCTGAAGCAGCACTACATTGACCTGAAGGACCGCCCATTCTTCCCAGGGTTGGTCAAGTACATGAACTCTGGGCC
AGTAGTGGCCATGGTCTGGGAGGGCCTGAATGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATT
CGAAGCCAGGCACCATCCGTGGGGACTTCTGCATTCAAGTGGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGT
GCTGAAAAAGAAATCAGCCTGTGGTTTAAGCCTGAGGAATTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCTACGA
ATAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008022 possible_ortholog 3 retrogenes
retro_amel_1573, retro_amel_390, retro_amel_538,
Bos taurus ENSBTAG00000047186 possible_ortholog 1 retrogene
retro_btau_1329,
Callithrix jacchus ENSCJAG00000018395 ortholog_one2many 5 retrogenes
retro_cjac_1765, retro_cjac_2517, retro_cjac_2642, retro_cjac_3940, retro_cjac_471,
Equus caballus ENSECAG00000021658 possible_ortholog 1 retrogene
retro_ecab_404,
Erinaceus europaeus ENSEEUG00000003783 possible_ortholog 2 retrogenes
retro_eeur_156, retro_eeur_5,
Felis catus ENSFCAG00000006742 possible_ortholog 5 retrogenes
retro_fcat_1083, retro_fcat_1117, retro_fcat_1475, retro_fcat_216, retro_fcat_663,
Homo sapiens ENSG00000011052 ortholog_one2many 1 retrogene
retro_hsap_1063,
Loxodonta africana ENSLAFG00000007784 possible_ortholog 1 retrogene
retro_lafr_636,
Myotis lucifugus ENSMLUG00000016929 possible_ortholog 3 retrogenes
retro_mluc_1422, retro_mluc_1882, retro_mluc_637,
Macaca mulatta ENSMMUG00000001940 ortholog_one2many 1 retrogene
retro_mmul_1827,
Monodelphis domestica ENSMODG00000012580 possible_ortholog 1 retrogene
retro_mdom_1811,
Mustela putorius furo ENSMPUG00000015573 possible_ortholog 4 retrogenes
retro_mputfur_1236, retro_mputfur_1590, retro_mputfur_327, retro_mputfur_912,
Mus musculus ENSMUSG00000020857 possible_ortholog 1 retrogene
retro_mmus_221,
Oryctolagus cuniculus ENSOCUG00000024946 possible_ortholog 1 retrogene
retro_ocun_418,
Otolemur garnettii ENSOGAG00000025331 possible_ortholog 9 retrogenes
retro_ogar_1326, retro_ogar_1875, retro_ogar_1997, retro_ogar_2373, retro_ogar_2393, retro_ogar_2779, retro_ogar_3299, retro_ogar_483, retro_ogar_95,
Rattus norvegicus ENSRNOG00000002671 possible_ortholog 8 retrogenes
retro_rnor_1129, retro_rnor_1610, retro_rnor_1708, retro_rnor_1784, retro_rnor_1966, retro_rnor_2646, retro_rnor_2951, retro_rnor_628,
Sarcophilus harrisii ENSSHAG00000014470 ortholog_one2many 3 retrogenes
retro_shar_130, retro_shar_554, retro_shar_781,
Sus scrofa ENSSSCG00000017591 possible_ortholog 1 retrogene
retro_sscr_854,
Tursiops truncatus ENSTTRG00000007433 possible_ortholog 1 retrogene
retro_ttru_1821,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_294 84.87 56.93
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2. retro_tbel_820 85.71 56.93
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3. retro_tbel_1271 70.50 51.69
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4. retro_tbel_1386 68.79 57.68
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5. retro_tbel_2497 91.33 55.81
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6. retro_tbel_4620 77.85 55.43
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Download FASTA sequences of all ENSTBEG00000013053 retrocopies