Parental gene: | Nme2, ENSRNOG00000002671 |
| Aliases: | Nme2, NDKB, nm23-2, p18-12d |
| Description: | Nucleoside diphosphate kinase B [Source:UniProtKB/Swiss-Prot;Acc:P19804] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:81478177..81483679(-) |
>ENSRNOG00000002671
ATGGCCAACCTCGAGCGTACCTTCATTGCCATCAAGCCAGATGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCG
ATTCGAGCAGAAGGGGTTCCGCCTGGTGGCCATGAAGTTCCTTCGGGCTTCTGAGGAACACCTGAAGCAGCACTATATTG
ACCTGAAAGACCGTCCTTTCTTCCCGGGGCTGGTGAAGTACATGAACTCAGGGCCTGTGGTGGCCATGGTCTGGGAGGGG
CTCAATGTGGTGAAAACAGGCCGAGTGATGCTGGGGGAGACCAATCCAGCTGATTCGAAGCCAGGCACCATTCGTGGGGA
TTTCTGCATTCAAGTTGGCAGGAACATCATTCACGGCAGTGATTCAGTGGAGAGTGCCGAGAAAGAGATCGGTCTATGGT
TTAAGCCCGAAGAACTGATTGACTATAAGTCTTGTGCCCATGACTGGGTGTATGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 76 .86 RPM |
| SRP017611_kidney | 163 .92 RPM |
| SRP017611_liver | 72 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008022 | possible_ortholog | 3 retrogenes | |
| Bos taurus | ENSBTAG00000047186 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018395 | possible_ortholog | 5 retrogenes | |
| Equus caballus | ENSECAG00000021658 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000003783 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000006742 | possible_ortholog | 5 retrogenes | |
| Homo sapiens | ENSG00000011052 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007784 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016929 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000001940 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012580 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015573 | possible_ortholog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000020857 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024946 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000025331 | possible_ortholog | 9 retrogenes | |
| Rattus norvegicus | ENSRNOG00000002693 | within_species_paralog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049152 | within_species_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014470 | ortholog_one2many | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000017591 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013053 | possible_ortholog | 6 retrogenes | |
| Tursiops truncatus | ENSTTRG00000007433 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_628 | 68.42 | 71.71 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_rnor_1129 | 83.22 | 96.05 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_rnor_1610 | 80.54 | 98.03 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_rnor_1708 | 65.85 | 53.95 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_rnor_1784 | 68.42 | 99.34 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 6. | retro_rnor_1966 | 63.89 | 68.42 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 7. | retro_rnor_2646 | 92.50 | 78.95 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 8. | retro_rnor_2951 | 78.38 | 71.71 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002671 retrocopies