Parental gene:

AIMP1, ENSSTOG00000008178

Aliases:None
Description:aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:10648]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393624.1:800154..835999(-)


>ENSSTOG00000008178
ATGCCTTCCAAATTAACAAGATTTATATTGTTTTTTAGCAAAAAAAAAATGGCAGGCAATGATGCTGTTCTGAAGAGACT
GGAACAGAAAGGCGCAGAGGCAGATCAAATCATTGAATATCTTAAGCAGCAAGTTGCTCTTCTTAAGGAGAAAACAATTT
TGCAGGCAACATTGAGAGAAGAGAAGAAACTTCGAGTTGAAAATGCTAAACTAAAGAAAGAAATTGAGGAACTGAAACTA
GAGCTGATTCAAGCAGAAATTCAAAATGGAGTGAAGCAAATACCATTTCCATCTGGTACCACGCTGCAAGCTAATTCCTT
GATTTCTGAAAATGTGATACACTCTTCACCAATAACAACTATATCTTCTGATACTAAAGAACAGATAAAAGGAGGAGGAG
AAGAAAAGAAGGTGAAAGAGAAAATTGAAAAAAAAGGAGAGAAGAAGGAGAAAAAACAACAATCATTAGCAGGAAGTGTT
GACTCTAAGCCAATAGATGTTTCCCGTCTGGATCTTCGAATTGGTTGCATCATTACTGCCAAAAAACACCCTGATGCAGA
TTCTTTGTATGTAGAAGAAGTAGATGTTGGAGAAACAGTCCCAAGAACAGTTGTCAGTGGCCTGGTGAATCATGTTCCTC
TTGAACAGATGCAAAATCGGATGGTGATTTTACTTTGTAACCTGAAACCTGCAAAGATGAGGGGAGTACTATCTCAAGCA
ATGGTGATGTGTGCTAGTTCACCAGAGAAAGTTGAAATTTTGGATCCTCCTAATGGATCTGTTCCGGGAGACAGAATTAC
TTTTGATACTTTCCCTGGAGAGCCTGACAAGGAGCTAAATCCTAAGAAGAAGATTTGGGAGCAGATCCAGCCTGACCTGT
ACACTAATGATGAGGGTGTGGCCACATATAAAGGAGCTCCCTTTGAGGTGAAAGGGAAGGGAGTATGTAGGGCTCAAACC
ATGACCAAGAGTGGAATCAAATAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000619 ortholog_one2one 2 retrogenes
retro_chof_1176, retro_chof_2050,
Callithrix jacchus ENSCJAG00000015885 ortholog_one2one 1 retrogene
retro_cjac_2504,
Dipodomys ordii ENSDORG00000005018 ortholog_one2one 1 retrogene
retro_dord_540,
Mustela putorius furo ENSMPUG00000008952 ortholog_one2one 1 retrogene
retro_mputfur_1606,
Mus musculus ENSMUSG00000028029 ortholog_one2one 2 retrogenes
retro_mmus_2271, retro_mmus_3334,
Pongo abelii ENSPPYG00000014981 ortholog_one2one 1 retrogene
retro_pabe_1780,
Rattus norvegicus ENSRNOG00000011384 ortholog_one2many 1 retrogene
retro_rnor_1704,
Tupaia belangeri ENSTBEG00000004412 ortholog_one2one 1 retrogene
retro_tbel_4008,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1173 64.97 53.21
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Download FASTA sequences of all ENSSTOG00000008178 retrocopies