Parental gene:

HNRNPDL, ENSTBEG00000002817

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein D-like [Source:HGNC Symbol;Acc:5037]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_5999:82773..86201(-)


>ENSTBEG00000002817
ATGGAGGTCTCGCCCCGGCTTTCCGTGCCGCCGCCCATATTCTCCGCTCCCGCTACTTTATCCCGCAGCCTCTCCCATTG
GGGGCCGCGGGCGGCGCGGCAGCTCGACCTTCTTCCTCTTGCTCCCTCCGCCCAGCAGGGGGCGCGCCGGGCCCAGCGCG
TCCCCGCCCAGCCCTCCCGAGCGGGCGAGGCTATAAAGGTGGGCAGGCGGCGCCCGGATCTCTTCCGCACCCATTTTAAA
TCCAGTTCCATACAACGCTCCGCCGCCACTGCTACCGCGACCCGAACTGCGCGCCAGCATCCCCGTGCCGACAGTTCCGC
CGCCATGGAGGACGTGAACGAATACAGCAACATAGAGGAATTCGCGGAGGGATCCAAGATCAACGCCAGCAAGAATCAGC
AGGATGACGGTAAAATGTTTATTGGAGGCTTGAGCTGGGATACAAGCAAGAAAGATCTGACTGAATATTTGTCTCGATTT
GGGGAAGTTGTAGACTGCACAATTAAAACAGATCCAGTCACTGGAAGATCAAGAGGATTTGGATTTGTGCTTTTCAAAGA
TGCTGCTAGTGTTGATAAGGTTTTGGAACTAAAAGAACACAAACTGGATGGCAAGTTGATAGACCCCAAAAGGGCCAAAG
CTTTAAAAGGGAAAGAACCTCCCAAAAAGGTTTTTGTGGGTGGACTGAGCCCAGATACTTCTGAAGAACAAATCAAAGAG
TATTTCGGAGCCTTTGGAGAGATTGAAAACATTGAACTTCCCATGGATACAAAAACAAATGAAAGAAGAGGATTTTGTTT
TATCACATATACAGATGAAGAGCCAGTAAAGAAATTATTAGAAAGCAGATACCATCAAATTGGTTCTGGGAAGTGTGAAA
TCAAGGTTGCACAACCCAAAGAGGTATATAGGCAACAACAACAACAACAAAAAGGAGGAAGAGGTGCTGCAGCTGGTGGA
AGAGGTGGTACTAGGGGTCGTGGCCGAGGTCAGGGTCAGAACTGGAACCAGGGATTTAATAACTATTATGATCAAGGATA
TGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCTATGGCGGATATGATTATACTGGGTATAACTATG
GGAACTATGGATATGGACAGGGATATGCAGACTACAGTGGCCAACAGAGTACTTATAAG

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000003887 ortholog_one2one 7 retrogenes
retro_dnov_1175, retro_dnov_1182, retro_dnov_144, retro_dnov_1603, retro_dnov_31, retro_dnov_723, retro_dnov_930,
Monodelphis domestica ENSMODG00000011916 ortholog_one2many 6 retrogenes
retro_mdom_1496, retro_mdom_1789, retro_mdom_1951, retro_mdom_2017, retro_mdom_546, retro_mdom_981,
Otolemur garnettii ENSOGAG00000002501 possible_ortholog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Sarcophilus harrisii ENSSHAG00000013616 ortholog_one2one 3 retrogenes
retro_shar_297, retro_shar_527, retro_shar_625,
Ictidomys tridecemlineatus ENSSTOG00000013979 possible_ortholog 1 retrogene
retro_itri_1177,
Tupaia belangeri ENSTBEG00000002327 within_species_paralog 1 retrogene
retro_tbel_2698,
Tupaia belangeri ENSTBEG00000008238 other_paralog 30 retrogenes
retro_tbel_1219, retro_tbel_156, retro_tbel_162, retro_tbel_1643, retro_tbel_1830, retro_tbel_1967, retro_tbel_2192, retro_tbel_2195, retro_tbel_2211, retro_tbel_2330, retro_tbel_261, retro_tbel_2666, retro_tbel_2673, retro_tbel_2703, retro_tbel_276, retro_tbel_2774, retro_tbel_2787, retro_tbel_2970, retro_tbel_3473, retro_tbel_3976, retro_tbel_3995, retro_tbel_4266, retro_tbel_4271, retro_tbel_453, retro_tbel_4653, retro_tbel_4729, retro_tbel_692, retro_tbel_70, retro_tbel_79, retro_tbel_839,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_2079 91.99 79.13
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_tbel_2283 88.16 81.17
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_tbel_2608 61.93 55.47
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_tbel_2874 74.91 69.72
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_tbel_3344 73.11 59.80
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_tbel_4302 89.21 79.13
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_tbel_4405 88.66 60.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTBEG00000002817 retrocopies