Parental gene: | ENSMODG00000011916 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:34901117..34905637(-) |
>ENSMODG00000011916
ATGGAGGTCCCGCCCCGGCTCTCGCAGGTGCCGCCGCCATTGTTTCCCTCGCCTCCCTCCGCTCTGGCCCCCCGCAACCT
CTCCCATTGGCGGCCCCGGGCTCCCCGGCAGCTTGCCCCGCTGCTGCCGTCGCTGAGTTCCGGCTCCGCCCGGCAGGGGG
CGCGCCGAGCGCCGCGCCACGTCACCGCCCCCCAGCCCTCCCGATTGGCGGGCGGGGCGTCTATAAAGGGAGGGCGCAGG
CGGCGCCCGGATCTCTTCCGCCGCCATTTTAAATCCGGCTCCATACACCGCGCTGCCGCTGCGACTCCCTCTCCGCGCCA
CCTGCCCCCGGCCGACAGCCCCGCCGCTATGGAGGACGTGAATGAGTACAGCAATATGGAGGAGTTCGCCGAAGGATCCA
AAATCAACGCCAGCAAGAATCAGCAGGACGACGGTAAAATGTTTATTGGAGGGCTAAGCTGGGATACGAGCAAGAAAGAT
CTCACTGAATACCTGTCTCGTTTTGGAGAGGTTGTAGACTGCACAATTAAAACAGATCCCGTCACGGGAAGATCGAGGGG
ATTCGGATTTGTGCTTTTCAAAGATGCTGCCAGTGTCGATAAGGTTCTGGAACTTAAAGAACACAAGTTAGATGGCAAGT
TGATAGACCCCAAAAGGGCTAAAGCTTTAAAGGGAAAGGAGCCCCCCAAAAAAGTATTTGTCGGCGGACTGAGCCCAGAT
ACGTCCGAAGAACAAATCAAGGAATATTTTGGAGCATTTGGAGAGATTGAGAATATTGAACTTCCTATGGACACAAAAAC
AAATGAAAGAAGAGGATTCTGTTTTATCACATATACAGATGAAGAACCAGTAAAGAAATTATTAGAAAACAGATATCATC
AGATTGGTTCTGGGAAGTGTGAAATCAAAGTTGCCCAGCCCAAAGAGGTATACAGGCAGCAACAACAACAACAGAAAGGA
GGGAGGGGCGCTGCAGCTGGTGGCCGAGGTGGGACTAGGGGTCGTGGCCGAGGTCAGGGCCAAAACTGGAACCAAGGATT
TAATAACTATTATGATCAAGGATATGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCTATGGCGGAT
ATGATTATACTGGGTATAACTATGGGAACTATGGATATGGACAGGGATATGCAGACTACAGTGGTCAACAAAGCACATAT
GGCAAAGCATCCAGAGGGGGTGGTAATCACCAAAACAATTACCAACCATATTAA
ATGGAGGTCCCGCCCCGGCTCTCGCAGGTGCCGCCGCCATTGTTTCCCTCGCCTCCCTCCGCTCTGGCCCCCCGCAACCT
CTCCCATTGGCGGCCCCGGGCTCCCCGGCAGCTTGCCCCGCTGCTGCCGTCGCTGAGTTCCGGCTCCGCCCGGCAGGGGG
CGCGCCGAGCGCCGCGCCACGTCACCGCCCCCCAGCCCTCCCGATTGGCGGGCGGGGCGTCTATAAAGGGAGGGCGCAGG
CGGCGCCCGGATCTCTTCCGCCGCCATTTTAAATCCGGCTCCATACACCGCGCTGCCGCTGCGACTCCCTCTCCGCGCCA
CCTGCCCCCGGCCGACAGCCCCGCCGCTATGGAGGACGTGAATGAGTACAGCAATATGGAGGAGTTCGCCGAAGGATCCA
AAATCAACGCCAGCAAGAATCAGCAGGACGACGGTAAAATGTTTATTGGAGGGCTAAGCTGGGATACGAGCAAGAAAGAT
CTCACTGAATACCTGTCTCGTTTTGGAGAGGTTGTAGACTGCACAATTAAAACAGATCCCGTCACGGGAAGATCGAGGGG
ATTCGGATTTGTGCTTTTCAAAGATGCTGCCAGTGTCGATAAGGTTCTGGAACTTAAAGAACACAAGTTAGATGGCAAGT
TGATAGACCCCAAAAGGGCTAAAGCTTTAAAGGGAAAGGAGCCCCCCAAAAAAGTATTTGTCGGCGGACTGAGCCCAGAT
ACGTCCGAAGAACAAATCAAGGAATATTTTGGAGCATTTGGAGAGATTGAGAATATTGAACTTCCTATGGACACAAAAAC
AAATGAAAGAAGAGGATTCTGTTTTATCACATATACAGATGAAGAACCAGTAAAGAAATTATTAGAAAACAGATATCATC
AGATTGGTTCTGGGAAGTGTGAAATCAAAGTTGCCCAGCCCAAAGAGGTATACAGGCAGCAACAACAACAACAGAAAGGA
GGGAGGGGCGCTGCAGCTGGTGGCCGAGGTGGGACTAGGGGTCGTGGCCGAGGTCAGGGCCAAAACTGGAACCAAGGATT
TAATAACTATTATGATCAAGGATATGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCTATGGCGGAT
ATGATTATACTGGGTATAACTATGGGAACTATGGATATGGACAGGGATATGCAGACTACAGTGGTCAACAAAGCACATAT
GGCAAAGCATCCAGAGGGGGTGGTAATCACCAAAACAATTACCAACCATATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015197 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000003887 | ortholog_one2many | 7 retrogenes | |
| Felis catus | ENSFCAG00000000455 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011454 | possible_ortholog | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000019803 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002501 | possible_ortholog | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000013616 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013979 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002817 | ortholog_one2many | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001793 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_546 | 60.53 | 69.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_981 | 58.82 | 60.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1496 | 85.80 | 79.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1789 | 72.18 | 58.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1951 | 59.87 | 70.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mdom_2017 | 76.47 | 64.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000011916 retrocopies