Parental gene: | HSPD1, ENSTTRG00000003417 |
| Aliases: | None |
| Description: | heat shock 60kDa protein 1 (chaperonin) [Source:HGNC Symbol;Acc:5261] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | GeneScaffold_1726:866373..875226(-) |
>ENSTTRG00000003417
ATGCTTCGATTGCCCGCAGTCCTTCGCCAGATTAGGCCAGTGTCCAGGGTACTGGCTCCTCATCTCACTCGGGCTTATGC
CAAAGATGTAAAATTTGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCTGATGCTGTAGCCGTTA
CTATGGGGCCAAAGGGAAGGACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTGACAAAAGATGGTGTAACTGTT
GCAAAGTCCATTGACTTAAAAGATAAATATAAAAATATTGGCGCGAAACTTGTTCAAGATGTTGCCAATAACACAAACGA
AGAGGCTGGGGATGGCACCACTACTGCGACTGTACTGGCACGCTCCATTGCTAAGGAAGGCTTCGAGAAGATTAGCAAAG
GTGCTAATCCCGTGGAAATCAGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAGAAGCAGTCTAAA
CCTGTGACAACCCCGGAAGAGATCGCCCAGGTTGCTACGATTTCTGCAAATGGAGACAAAGAAATCGGCAGCATCATTTC
TGATGCGATGAAAAAGGTTGGAAGAAAGGGCGTTATCACAGTAAAGGATGGAAAAACACTGAATGATGAATTAGAAATTA
TTGAAGGCATGAAGTTTGATAGAGGGTATATCTCTCCATACTTTATTAATACATCAAAAGGTCAGAAATGTGAATTCCAA
GATGCCTATGTTCTGTTAAGTGAAAAGAAAATTTCTAGTGTCCAGTCCATTGTTCCTGCTCTTGAAATTGCCAATGCTCA
CCGTAAGCCCTTGGTCATAATTGCTGAAGACGTGGATGGAGAAGCTCTAAGTACACTCGTTTTGAATAGGCTGAAAGTTG
GTCTTCAGGTTGTAGCAGTCAAAGCTCCAGGTTTTGGTGACAATAGAAAGAACCAGCTTAAAGACATGGCTATTGCTACT
GGTGGTGCAGTATTTGGAGAAGAAGGACTAACTCTAAATCTTGAAGATGTTCAGCCTCATGACTTAGGAAAAGTTGGAGA
GGTCATTGTGACCAAAGACGATGCCATGCTCTTGAAAGGAAAAGGTGACAAGGCTCAAATTGAAAAGCGTATTCAAGAAA
TCATCGAGCAGTTAGATATTACAACTAGTGAATATGAAAAGGAAAAATTGAATGAACGTCTGGCAAAACTCTCAGATGGT
GTTGCTGTGCTAAAGGTTGGTGGGACAAGTGATGTTGAAGTGAATGAAAAGAAAGACAGAGTTACAGATGCCCTTAATGC
TACACGAGCTGCTGTTGAAGAAGGCATTGTTTTGGGAGGGGGCTGTGCCCTGCTTCGGTGCCTTCCAGCCTTGGATTCAA
TAACTCCAGCTAATGAAGATCAAAAAATTGGTATAGAAATTATTAAAAAAGCACTCAAAATTCCTGCAATGACCATTGCT
AAGAATGCAGGTGTCGAAGGATCGTTGATAGTTGAGAAAATTTTGCAAAGTTCTTCAGAAATTGGTTATGATGCTATGCT
TGGAGATTTTGTGAATATGGTGGAAAAAGGAATCATTGATCCAACTAAGGTTGTAAGAACTGCATTACTGGATGCTGCTG
GAGTGGCCTCTCTGTTAACTACAGCAGAAGTTGTAGTCACAGAAATTCCTAAAGAAGAGAAGGATCCTGGAATGGGCGGA
ATGGGTGGGATGGGAGGTGGGATGGGAGGTGGCATGTTCTAA
ATGCTTCGATTGCCCGCAGTCCTTCGCCAGATTAGGCCAGTGTCCAGGGTACTGGCTCCTCATCTCACTCGGGCTTATGC
CAAAGATGTAAAATTTGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCTGATGCTGTAGCCGTTA
CTATGGGGCCAAAGGGAAGGACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTGACAAAAGATGGTGTAACTGTT
GCAAAGTCCATTGACTTAAAAGATAAATATAAAAATATTGGCGCGAAACTTGTTCAAGATGTTGCCAATAACACAAACGA
AGAGGCTGGGGATGGCACCACTACTGCGACTGTACTGGCACGCTCCATTGCTAAGGAAGGCTTCGAGAAGATTAGCAAAG
GTGCTAATCCCGTGGAAATCAGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAGAAGCAGTCTAAA
CCTGTGACAACCCCGGAAGAGATCGCCCAGGTTGCTACGATTTCTGCAAATGGAGACAAAGAAATCGGCAGCATCATTTC
TGATGCGATGAAAAAGGTTGGAAGAAAGGGCGTTATCACAGTAAAGGATGGAAAAACACTGAATGATGAATTAGAAATTA
TTGAAGGCATGAAGTTTGATAGAGGGTATATCTCTCCATACTTTATTAATACATCAAAAGGTCAGAAATGTGAATTCCAA
GATGCCTATGTTCTGTTAAGTGAAAAGAAAATTTCTAGTGTCCAGTCCATTGTTCCTGCTCTTGAAATTGCCAATGCTCA
CCGTAAGCCCTTGGTCATAATTGCTGAAGACGTGGATGGAGAAGCTCTAAGTACACTCGTTTTGAATAGGCTGAAAGTTG
GTCTTCAGGTTGTAGCAGTCAAAGCTCCAGGTTTTGGTGACAATAGAAAGAACCAGCTTAAAGACATGGCTATTGCTACT
GGTGGTGCAGTATTTGGAGAAGAAGGACTAACTCTAAATCTTGAAGATGTTCAGCCTCATGACTTAGGAAAAGTTGGAGA
GGTCATTGTGACCAAAGACGATGCCATGCTCTTGAAAGGAAAAGGTGACAAGGCTCAAATTGAAAAGCGTATTCAAGAAA
TCATCGAGCAGTTAGATATTACAACTAGTGAATATGAAAAGGAAAAATTGAATGAACGTCTGGCAAAACTCTCAGATGGT
GTTGCTGTGCTAAAGGTTGGTGGGACAAGTGATGTTGAAGTGAATGAAAAGAAAGACAGAGTTACAGATGCCCTTAATGC
TACACGAGCTGCTGTTGAAGAAGGCATTGTTTTGGGAGGGGGCTGTGCCCTGCTTCGGTGCCTTCCAGCCTTGGATTCAA
TAACTCCAGCTAATGAAGATCAAAAAATTGGTATAGAAATTATTAAAAAAGCACTCAAAATTCCTGCAATGACCATTGCT
AAGAATGCAGGTGTCGAAGGATCGTTGATAGTTGAGAAAATTTTGCAAAGTTCTTCAGAAATTGGTTATGATGCTATGCT
TGGAGATTTTGTGAATATGGTGGAAAAAGGAATCATTGATCCAACTAAGGTTGTAAGAACTGCATTACTGGATGCTGCTG
GAGTGGCCTCTCTGTTAACTACAGCAGAAGTTGTAGTCACAGAAATTCCTAAAGAAGAGAAGGATCCTGGAATGGGCGGA
ATGGGTGGGATGGGAGGTGGGATGGGAGGTGGCATGTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013770 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000012586 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010865 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003990 | possible_ortholog | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013226 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000009184 | possible_ortholog | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000000053 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011987 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000871 | possible_ortholog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000010489 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012289 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007818 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034053 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014525 | possible_ortholog | 9 retrogenes | |
| Xenopus tropicalis | ENSXETG00000007509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_951 | 88.71 | 65.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_1661 | 95.61 | 99.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ttru_1798 | 85.66 | 85.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000003417 retrocopies