RetrogeneDB ID: | retro_mputfur_434 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896909.1:8303841..8304856(-) | ||
Located in intron of: | ENSMPUG00000000427 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000007818 | ||
Aliases: | None | ||
Description: | Heat shock 60kDa protein 1 [Source:UniProtKB/TrEMBL;Acc:G9K4Y8] |
Percent Identity: | 69.34 % |
Parental protein coverage: | 59.3 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 8 |
Parental | KGQKCEFQDAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGL-QVVAVK |
K.QKC.FQDAYVL.SEKKI.SVQSIV.ALE.ANAH.KPLVI.A.D.DGEALST.VLNR.KVG..QVVAVK | |
Retrocopy | KSQKCKFQDAYVLPSEKKIPSVQSIVLALETANAHLKPLVITAKDTDGEALSTQVLNRSKVGF>QVVAVK |
Parental | APGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLL-KGKGDKAQIEKR |
AP.FGDN.KN.LKD.A.AT.GA.F.EEG.TLNL.DV.PH.LGK.GEV.V.K.DAMLL.KGK.DKAQ.EKR | |
Retrocopy | APDFGDNTKN*LKDVAVATDGAMFAEEGSTLNLKDV*PHNLGKFGEVTVAKNDAMLL<KGKDDKAQTEKR |
Parental | IQEIIEQLDITT-SEYEKEKLNERLA-KLSDGVAVLKVGGTSDVEVNEKKDRVTDALNA-TRAAVEEGIV |
IQEIIEQLD.TT..E.EK..LNE.LA.KLSDGVA.LK.G..S...V.EK..RV..AL.A...AAVE.G.V | |
Retrocopy | IQEIIEQLDMTT<QEKEK--LNEHLA<KLSDGVAGLKSGEKSGKKVHEKTGRVAGALRA>SVAAVEAGSV |
Parental | LG-GGCALLRCIPALDSLTPTNEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSPEVGYDAM |
LG.GGCALL..IPALDS.TP.NED.K.G.EI.K.TL.IP....AKN.GVE..L.VEKI..SS.EVGYD.M | |
Retrocopy | LG>GGCALLWHIPALDSITPPNEDPKLGTEIMKQTLEIPVISTAKNSGVERALTVEKIT*SSSEVGYDTM |
Parental | LG-DFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPAM-GGMGGMGGGMGGGMF |
...D.VNMVEKG..DPTK.VRT.LL.AA.VASLLTTAEVV.T....E.K.P.M.G.M.G..GG.GGG.F | |
Retrocopy | FE<DSVNMVEKGTTDPTKTVRTVLLNAAEVASLLTTAEVVITGVLQEGKGPGM<GAMSGGRGGVGGGRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |