Parental gene:

MTR_3g434840

Aliases:None
Description:pre-mRNA-splicing factor cwc22, putative
Organism:Barrel medic (Medicago truncatula)
Coordinates:3:11335846..11342445(+)


>MTR_3g434840
ATGGGTAGAGGCGAAGGAAGTGAATCGTCCGAGGAAGAAGGGCAGTTCGTCAGAAATCGTGAAGAGAAGCGAGACCGCCG
TGGAGCTGACGTGGAGGATCTTCGCCGGAAACATCGTGGTAGTGAAGATTTAGAGGAAGAAGTTGATCGAAAAAAGAATA
GGGATAGGGATAGGGATAACCGTCGAAGGTATAAGGGTTCTTCAGATGAAGAACGTGATGTGAAGAGAATTAGGGATAGG
GAAAGAAGGCATAGGGCTGATAGGGTTAGGGATAATGATAATGATAAGGAGAGAGATCGGCGTCGTCGGTATAAGGATGA
TTCGGATGAGGAATATGATAAGAAGAGGAATTTGGATAGGGAAAGGAGGCATAGAGTTGATAGGGATGATGATAATGATA
ATGAGAAGGACAGGAAGAGAGAGAGGGATCGACGCGATGACGATGATAGGAGGAATGTGGAGAGAAGGGATAGAGTTGAA
AAGAATGGTGGTGATAATGAGAGGGAAGAAAGTAAGAAGAAAGAGGAAGGAAGTGGGAGAGCGAGGACGGTGATACCGGC
AAGTGTGATAAATGGAGATGCATCTAAATTAGGGAAAAGTGGAGGGGTTTACATTCCCCCGTTTAAGTTAGCGAGGATGA
TGAAGGAAGTTGACGATAAGAGTAGTCCGGAGTATCAGAGGTTGACTTGGGATGCTTTAAGGAAGAGTATTAATGGATTG
GTGAATAAGGTGAATGCTACTAATATTACGAATATAATTCCGGAGTTGTTTGCGGAGAATTTGATTCGTGGAAGAGGGTT
GTTTTGTAGATCGTGTATGAAGTCACAGATGGCGTCACCCGGGTTTACGGATGTATTTGCTGCGATGGTTGCTGTTGTTA
ACACAAAGTTTCCCCAAGTTGGTGATCTTTTACTTAGGAGGATCGTTTTGCAGCTGAAAAGAGCGTATAAGCGTAATGAC
AAGCCTCAATTACTTGCTGCTGTGAAGTTTGTAGCACATTTGGTGAATCAGCAAGTGGCTCACGAGATTATCGCGCTAGA
GCTGCTCACGGTTTTACTCGAGAAGCCTTCCGATGACAGTGTTGAAGTGGCTGTTGGTTTTGTGACAGAAGTTGGCTCAA
TGCTGCAGGATCTCTCACCTAGAGGACTTCATGGTATCTTTGAGCGTTTTCGTGGAATTCTGCATGAAGGAGAAATTGAC
AAACGTGTTCAATTTCTAATTGAAGGATTATTTGCCATAAGAAAGGCAAAGTTTCAGGGTTATCCAGCTGTTCGGCCTGA
ACTTGACCTCGTGGAGCAGGAAGATCAGTTAACCCACGAAGTCTCCTTGGATGAGGAAATAGATCCCGAGACTTCCCTTG
ACATATTCAAACCTGACCCCAATTATCTGGAGAACGAGAAGCGTTATGAAGAGTTGAAGAAAACCTTGCTGGGTGAGGAA
GAGGAATCAGAGGGAGAGGAAGGCTCGGATGCTGAATCGGATGAAGATGATGAATCCGATGAAGAGGACGAGGAAGCTAT
GCAGATAAAAGATGAAACAGAGACTAATCTTGTCAATCTGCGGAGGACTATCTATCTAACAATAATGTCCAGTGTAGATT
TTGAGGAAGCAGGTCATAAGCTTCTAAAAATCCATCTTGAGCCAGGTCAAGAGATGGAATTGTGCACTATGCTTCTCGAA
TGTTGCAGCCAGGAGAGAACTTATCTCCGATATTACGGTCTTCTTGGGCAGCGTTTCTGCATGATTAACAAAGTTCATCA
AGAAAATTTTGAGAAGTGCTTCGTGCAGCAGTATTCATTGATCCACAGGCTCGAAACAAATAAATTGAGAAACGTGGCTA
AATTTTTTGCTCATTTGCTTGGGACTTTTGCTCTGCCTTGGCACGTCTTATCTTACATTCGCCTGACTGAGGACGACACA
ACTTCTTCTTCGCGTATATTTATTAAGATTCTCTTCCAGGAATTGTCAGAGCATCTAGGCATCCGGTTGCTAAATGAGAG
GTTAAATGATCCAACCATGCAGGATTCTTTTGAATCCATTTTTCCCAAGGACAACCCTAAAAACACACGATTCTGCATCA
ATTTTTTCACATCCATTGGTCTTGGTGGTCTTACTGAGAATCTGCGTGAGTATTTGAAAAATATGCCAAGGATGATCATG
CAACAACAGAAGCAAGTTTCAGATTCTGACTCGGATAAAAATTCTGCAAGCTCCGATTCATCAGATTCGGGAACCAGTTC
GGAGTCAGAGTCAAGTTCTGATGAAAGTGATAGAGAAAGAAGAAAACGTAGAAGAAAATAA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI4G39400 ortholog_one2one 1 retrogene
Sorghum bicolor Sb03g029810 ortholog_one2one 1 retrogene
Arabidopsis lyrata scaffold_202963.1 ortholog_one2many 1 retrogene
Solanum lycopersicum Solyc04g079920.2 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mtru_18 72.62 57.31
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Download FASTA sequences of all MTR_3g434840 retrocopies