Parental gene:

Si004698m.g

Aliases:None
Description:None
Organism:Foxtail millet (Setaria italica)
Coordinates:5:33059941..33062024(+)


>Si004698m.g
ATGGGGCCCCTCCTCCGCGCCGCCGTCCTCTCCGCCGCGCTCCTGGCCCTCGCCGCCGCGGGCGCCGAGGCGCACAGCGT
CAGCGAGTTCCTCAACATCTTCCGGCCCCGCAACGAGCACGACTACTTCCACAACGCGAACCAGGGGCAGCAGGAGGAGA
ACGTTGTGCCCCGGGCCAGCGACCAGCAGAGCCTCATCGCGGCGCCGGTGAGCCAGAGCGGGCTCATGAAGGTGCCCGCC
CGGTCCGCGCCCACCGCGGCGGGGCAGGACACGATCACGATCCCCGTCGACGACCACACTGCGGGCAACGCCGGCGCGTG
GTCCACCATCACCGAGAACGCCGGCGTGTCGGCGATGCACATGGTGATCATGCGGAACGACAGGGCCATCATGTTCGACA
CCGTCACCACGGGGCCCTCGCTGCTGAGGCTGCCCAAGGGGAACTGCCGCCTCGACCTCCGGAGCAAGCAGCAGGGCGCC
CAGGACTGCGCCGCGCACGCCGTCGAGTTCGATTACGCCACCGGCGGGGTCAGGGCCCTAAAGATCTTAACGGACGTGTG
GTGCTCGTCGGGCGCGCTCGACGCAGAGGGCAACCTCGTGCAGACCGGCGGCTACTTCGAGGGCGAGAAGGTGGTGCGGT
ACCTGAGCCCGTGCGGCAACTGCGACTGGAGGGAGTTCCCGGCGAGCCTGGCCGAAGGAAGATGGTACGGGACGCAGCAG
ATCCTCCCGGACGGCCGCTCCATCGTGCTCGGTGGCCGGCGCGCGTTCAGCTACGAGTTCGTCCCAGCGGAGGGCCAGGC
GAACACCCAGGCCAACCCCCTCCAGATACTCCGCGACACCACCGACGACGTGGAGAACAACCTGTACCCGTTCGTCCACC
TCCTCACCGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCGTCGTGTTCGACTACCGGAACGGCCAGGTCGTCCGC
GAGCTCCCCGTCCTCCCCGGCGGGGGCAGGAACTACCCCGCCTCCGGCATGTCCGCGCTCCTCCCCCTCGACCTCCGCCG
CGGCGACGTGCTCAGCCCCGAAGTCATCGTCTGTGGCGGCACCCCCAAGAACGCCTTCAAGCTCGGGGAGACCAACACCT
TCAACCCCGCGCTCAAGGACTGCGCGCGCATCAACCCGCTGAAGCCCGACGCCCGGTGGGCGATCGACCAGATGCCCGTG
GCCCGCACCATGGGCGACCTGCTGATCCTCCCCACCGGCGACCTCCTCATGCTGAACGGCGCCGCCAGGGGGTGCTCCGG
CTGGGGCTTCGCCAGGCAGCCGGTGCTGACCCCGCTCCTGTACTCGCCGCGGCAGCCGCGGGGGAAGCGGTTCCGCGCGC
TGGCTGCGACAGCCATCGCGCGCATGTACCACGCCACCAGCGCGGTGCTGCCCGACGCCACCGTGCTCGTGGCCGGCAGC
AACACCAACTCCGCCTACAACTTCAGCGGCGTCGACTTCCCCACCGAGGTGCGCGTCGAGCGGTTCACGCCGCCGTACCT
CGCCGCGGGGCGCGCCCACAACCGGCCCGTGATCGACGCGGCGACCGTCCCCGGCGGCGGGATGGCGTACGGGTCCCAGT
TCACGCTCCAGTTCACGACGCCCGCGCTGCCCGTAGCCGAGACCGACATGAAGGTGACCATGTACGCGCCGCCCTTCACG
ACGCACGGCTTCTCCATGAACCAGCGGCTGCTGGTGCTGTCCGTCACGGCCTTCGTGCCCAAAGGGCCGAACAGGTACAC
GATCACCGTCGGCGCGCCGGGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTGCTGTACGTCATGGCGCAGGGGGTGC
CGAGCAAGGCCGTGTGGGTGAAGGTACACAATTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA004194 ortholog_one2one 1 retrogene
retro_oind_16,
Brachypodium distachyon BRADI2G46477 ortholog_one2one 1 retrogene
retro_bdis_13,
Oryza glumaepatula OGLUM01G30230 ortholog_one2one 1 retrogene
retro_oglu_1,
Oryza meridionalis OMERI01G24080 ortholog_one2one 1 retrogene
retro_omer_13,
Oryza glaberrima ORGLA01G0215900 ortholog_one2one 1 retrogene
retro_ogla_7,
Oryza sativa japonica OS01G0677000 ortholog_one2one 1 retrogene
retro_osat_22,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sita_36 65.17 99.20
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Download FASTA sequences of all Si004698m.g retrocopies