RetrogeneDB ID: | retro_amel_1183 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193013.1:159697..159966(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFZ | ||
Ensembl ID: | ENSAMEG00000000959 | ||
Aliases: | None | ||
Description: | H2A histone family, member Z [Source:HGNC Symbol;Acc:4741] |
Percent Identity: | 63.83 % |
Parental protein coverage: | 72.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | HLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL-DSLIKAT |
HLKSR.TSH..VG.TA.VYS.AILEYL..E.LELAGNASKDL.VK.I....L.LAI.G..EL.DSLIK.. | |
Retrocopy | HLKSRMTSHWHVGMTATVYSVAILEYLIMEILELAGNASKDLNVKSIIHNYLHLAICGEQEL<DSLIKVV |
Parental | IAGGGVIPHIHKSLIGKKGQQKTV |
......I.H.H.SLI.K..QQKTV | |
Retrocopy | VV---TIQHTHRSLIEKTRQQKTV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |