RetrogeneDB ID: | retro_etel_1321 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_246676:5412..5739(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 53.15 % |
Parental protein coverage: | 95.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | RNNGRAKKGRGHVQPI-RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC |
RNN.RA.KG.G.V.PI.RCTN.A.C.P.DKA....VI...VE.AA..DISE.SVFDAY..P.....LH.C | |
Retrocopy | RNNDRARKGHGRVEPI<RCTNGAHCGPRDKATQGVVIQKMVEDAALKDISETSVFDAYMFPQR*GTLHGC |
Parental | VSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAP-RPPPKP |
.S...HS.VV..RS.EARKD.............P.RP.PKP | |
Retrocopy | RSSVLHSRVVMSRSPEARKDXXXXTLIETCRGCP>RPTPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |