RetrogeneDB ID: | retro_etel_1971 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_320840:79112..79609(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | IMMP1L | ||
Ensembl ID: | ENSETEG00000003057 | ||
Aliases: | None | ||
Description: | IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26317] |
Percent Identity: | 78.44 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MLRGVLGKSFRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRGDIVI |
MLRGVLG..F.LVG.TI.YGC..HCAFEYVGG.VMCSGPSME.T.QN.DIVF.E.LS....G.Q.G.IVI | |
Retrocopy | MLRGVLGNLF*LVGSTIWYGCTVHCAFEYVGGGVMCSGPSMETTTQNLDIVFTEYLSQPVCGMQGG*IVI |
Parental | AKSPSDPKSNICKRVIGLEGDKIHTSSSSDFFKSHSYVPM-HVWLEGDNLQNSTDSR-YYGPIPYGLIRG |
.KSPSDPKSNI.KRVI.LEGDK..TS.SSDFFKSHSYVP..HVWLE.DNLQNSTDSR..YGPIPYGLIRG | |
Retrocopy | VKSPSDPKSNIYKRVIDLEGDKLLTSNSSDFFKSHSYVPISHVWLESDNLQNSTDSR<VYGPIPYGLIRG |
Parental | RIFFKIWPLSDFGFLRDSPNGHRFSDD |
RIFF.I.PLSDFGFL.D.PNGHRFS.D | |
Retrocopy | RIFFMIGPLSDFGFL*DIPNGHRFSND |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |