RetrogeneDB ID: | retro_etel_612 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_102687:10..313(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LYPLA1 | ||
Ensembl ID: | ENSETEG00000001727 | ||
Aliases: | None | ||
Description: | lysophospholipase I [Source:HGNC Symbol;Acc:6737] |
Percent Identity: | 77.14 % |
Parental protein coverage: | 56.42 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | HGWAEAF-AGIRSSHIKYICPHA-PL-MPVTLNMNMTMPSWFDII-GLSPDAQEDEHGIKQAAENLKALI |
HGWAEAF.AGIRSSHI.YI.PH..PL..PV.LN...T.PSWFD.I.GL.PDAQE.E.GIKQAAE.LKAL. | |
Retrocopy | HGWAEAF>AGIRSSHINYIRPHG<PL<IPVLLNRSRTVPSWFDVI>GLHPDAQEEERGIKQAAESLKALV |
Parental | DQEVKNGIPSNRIILGGFSHGGALSLYTALTTQQK |
D.EVKNG.PSNRII.GGFS.GGALSLYTAL.TQQK | |
Retrocopy | DEEVKNGTPSNRIIWGGFSPGGALSLYTALSTQQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |