RetrogeneDB ID: | retro_ggor_104 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 16:68764806..68765112(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000027363 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000170860 | ||
Ensembl ID: | ENSGGOG00000010006 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.29 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEET |
MADDV.QQQTTNTVE.PLDL.RLS..ERI.VKMRN.RELRGRLH.YDQHLNMILGDVEETVTTIEIDEET | |
Retrocopy | MADDVEQQQTTNTVEDPLDL-RLSPEERICVKMRNNRELRGRLHTYDQHLNMILGDVEETVTTIEIDEET |
Parental | YEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG |
YEE.Y.STK.NIP.LFVRGDG..LV.PPLRVG | |
Retrocopy | YEETYESTKQNIPVLFVRGDGIFLVVPPLRVG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .05 RPM | 14 .39 RPM |
SRP007412_cerebellum | 0 .04 RPM | 13 .99 RPM |
SRP007412_heart | 0 .03 RPM | 8 .82 RPM |
SRP007412_kidney | 0 .00 RPM | 65 .91 RPM |
SRP007412_liver | 0 .00 RPM | 23 .37 RPM |
SRP007412_testis | 0 .00 RPM | 48 .17 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_1654 |
Pan troglodytes | retro_ptro_1125 |
Pongo abelii | retro_pabe_1366 |