RetrogeneDB ID: | retro_meug_1771 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold58002:3221..3540(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TXNDC17 | ||
Ensembl ID: | ENSMEUG00000008946 | ||
Aliases: | None | ||
Description: | thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:28218] |
Percent Identity: | 61.26 % |
Parental protein coverage: | 90.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | HCEEVRVSGFGDFCGAVEQHRDKTIFVYFTGDKDAEGRSWCPD-CVQAEPVVLEALKHIPENAVFIYCQV |
H.EEV.V..FG.FC..VEQHRDKTIF..F.GD..A.GR...P....Q.E.VVLEALKH.PENA...YC.V | |
Retrocopy | HYEEVSV*DFGNFCWSVEQHRDKTIFPSFLGDRHAVGRHQFPE>GMQTEYVVLEALKHVPENA---YCHV |
Parental | GDRPYWKDPNNDFKKKLKLTAVPTLLKYGTPQKLVEAECLK |
...PYWKDPNN.F.KK..L..V.TLL.Y..PQKL.E.E.LK | |
Retrocopy | RGWPYWKDPNNEF-KKVNLSEVMTLLQY*MPQKLAELERLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |