RetrogeneDB ID: | retro_tsyr_1058 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_291609:1529..1819(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TXNDC17 | ||
Ensembl ID: | ENSTSYG00000010996 | ||
Aliases: | None | ||
Description: | thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:28218] |
Percent Identity: | 78.57 % |
Parental protein coverage: | 78.05 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | IFAYF-TGSKDAEGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDF-RKNLKVTAVP |
IF.YF.TGSK...GK.WCPDCV.AEPVV..GLKHISEGCVFI.CQVGEK.YWKDPNNDF..KNLKVTAVP | |
Retrocopy | IFTYF>TGSKNTKGKNWCPDCVPAEPVVGVGLKHISEGCVFICCQVGEKFYWKDPNNDF>EKNLKVTAVP |
Parental | TLLKCGTPQKLVESECLQANLVEMMFSE |
TLLK.GTPQKLV.SEC..ANL.EM.F.. | |
Retrocopy | TLLKYGTPQKLVVSECP*ANLMEMFFED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |