RetrogeneDB ID: | retro_tsyr_982 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_262530:649..1013(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TXNDC17 | ||
Ensembl ID: | ENSTSYG00000010996 | ||
Aliases: | None | ||
Description: | thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:28218] |
Percent Identity: | 80.8 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MARYEEVTVSGFEEFKRAVEQHNGKTIFAYFTGSKDAEGKSWCPDCVQAEPVVREG-LKHISEGCVFIYC |
M.RYEE..V.GFE.FKR.VEQHNG.TIFAYFTGSKDAEGKSW.PDC..AEP.V..G.LKHISEGCVFIYC | |
Retrocopy | MVRYEEASVFGFEKFKRTVEQHNGNTIFAYFTGSKDAEGKSW*PDCM*AEP-VKKG<LKHISEGCVFIYC |
Parental | Q-VGEKPYWKDPNNDFRKNLKVTAVPTLLKCGTPQKLVESECLQANLVEMMFSED |
Q.VGEK.YWKD....FRKNLKV.AVPTLLK.GTPQKLVES.CLQANLVEM.FSED | |
Retrocopy | Q<VGEKLYWKDSDKNFRKNLKVNAVPTLLKYGTPQKLVESVCLQANLVEMLFSED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |