RetrogeneDB ID: | retro_meug_275 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_8894:35379..35840(+) | ||
Located in intron of: | ENSMEUG00000000173 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NMRK1 | ||
Ensembl ID: | ENSMEUG00000009787 | ||
Aliases: | None | ||
Description: | nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:26057] |
Percent Identity: | 81.94 % |
Parental protein coverage: | 99.35 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VTNGGKTTLAQKLQKQLPNCSVISQDDYFKPESEIKVDENGFLQYDVLEALNMETLMSSVYSWMKNPRDS |
VTNGGKTTL..KL.KQL.NCS.ISQDDYFKPES.IK.D.NGFLQYDVLEA..METL.S.VYSWMKNPR.S | |
Retrocopy | VTNGGKTTLTKKL*KQLLNCSIISQDDYFKPESGIKMDKNGFLQYDVLEAPSMETLISTVYSWMKNPRNS |
Parental | PESDDLEGAEEVPILIIEGFLLYTYKPLDPLWNRSYFLTIPYEECKRRRSTRVYEPPDPPGYFDNHVWPM |
.ESDDLE.AEEVPILIIEGFLL.TYK.LD..WNRSYFLTIPYEECK.RR.TRVYEPPD.PGYFD..VWP. | |
Retrocopy | LESDDLESAEEVPILIIEGFLLCTYKLLDTVWNRSYFLTIPYEECK*RRNTRVYEPPDLPGYFDSRVWPV |
Parental | YLKHR-KEIEDIARN |
YLKH..KEIEDIAR. | |
Retrocopy | YLKHK<KEIEDIARS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005312 | 1 retrocopy | |
Felis catus | ENSFCAG00000028823 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009787 | 1 retrocopy |
retro_meug_275 ,
|
Mustela putorius furo | ENSMPUG00000012337 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000006121 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000004063 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000004232 | 1 retrocopy |