RetrogeneDB ID: | retro_meug_93 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_207:28607..28836(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000001631 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.26 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MPKCPKCQKEVYFAER-VTSLGKDWHRPCLKCE-KCGKTLTSGGHAEHEGKPYCNHPCYAAMF--GPKGF |
M.KCPKC.KE.Y.AE..VT.LGKDW...CLKCE...GK...SGGH..HEG........Y..M...GPKG. | |
Retrocopy | MTKCPKCEKEFYLAEQ<VTCLGKDWYPFCLKCE<EMGKK--SGGHTRHEGRH*YSPLGYTVMLRTGPKGY |
Parental | GRGGAESHTFK |
GRGGAESH.FK | |
Retrocopy | GRGGAESHPFK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000047229 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000019788 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000001365 | 1 retrocopy | |
Homo sapiens | ENSG00000213145 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000027381 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000001631 | 1 retrocopy |
retro_meug_93 ,
|
Macropus eugenii | ENSMEUG00000010504 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000007158 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000006209 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000033768 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000014240 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000027990 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000000807 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000004063 | 1 retrocopy |