RetrogeneDB ID: | retro_mputfur_1287 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897069.1:2234266..2234544(+) | ||
Located in intron of: | ENSMPUG00000007965 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HIGD1A | ||
Ensembl ID: | ENSMPUG00000011870 | ||
Aliases: | None | ||
Description: | HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] |
Percent Identity: | 79.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSTGTDVSLSSYDEDQGSKLIRKAKEAPFVPIGMAGFAAIVAYGLYKLKSR-GNTKMSVHLIHMRVAAQG |
MS.G.DVSLSS....QGSKLI.KAK.A.FVPIG.AGFAAIVAYGLYKLK.R.GNTKMSVHLIHM.VAAQ. | |
Retrocopy | MSIGMDVSLSSSRKGQGSKLI*KAKDALFVPIGTAGFAAIVAYGLYKLKRR<GNTKMSVHLIHMHVAAQS |
Parental | FVVGAMTLGMGYSMYKEFWAKPKP |
FV.GA.TL.MG.SMYKEFW.KPKP | |
Retrocopy | FVMGAVTLVMGCSMYKEFWTKPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |