RetrogeneDB ID: | retro_mputfur_961 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896981.1:4932791..4933084(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TDGF1 | ||
Ensembl ID: | ENSMPUG00000015167 | ||
Aliases: | None | ||
Description: | teratocarcinoma-derived growth factor 1 [Source:HGNC Symbol;Acc:11701] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 53.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RSREEPAVRHRSSPFVPTLGIQDSKELNR-TCCLNGGTCMLGSFCACPPSFYGRNCEHDSRKENCESVPH |
.SREEPA..H.S...V...GIQD.KELN..TCCLN.GT.ML.SFC.CPPS.YG..CEH...KEN.ESVP. | |
Retrocopy | QSREEPASCHWSFQSVLSIGIQDTKELNK<TCCLNEGTFMLWSFCGCPPSSYGWHCEHKWSKENYESVPC |
Parental | DTWLPRRCSMCKCWRGRLHCFRQTFLPGC |
DTWLP..CS.CK.W.G.LH.F.QTFLPGC | |
Retrocopy | DTWLPKKCSKCKSWHGLLHFFPQTFLPGC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000002174 | 3 retrocopies | |
Felis catus | ENSFCAG00000014508 | 1 retrocopy | |
Homo sapiens | ENSG00000241186 | 7 retrocopies | |
Gorilla gorilla | ENSGGOG00000003453 | 5 retrocopies | |
Loxodonta africana | ENSLAFG00000009140 | 4 retrocopies | |
Microcebus murinus | ENSMICG00000016492 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000003088 | 6 retrocopies | |
Mustela putorius furo | ENSMPUG00000015167 | 1 retrocopy |
retro_mputfur_961 ,
|
Mus musculus | ENSMUSG00000032494 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000006143 | 6 retrocopies | |
Otolemur garnettii | ENSOGAG00000017039 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000014854 | 7 retrocopies | |
Tarsius syrichta | ENSTSYG00000013609 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000017299 | 1 retrocopy |