RetrogeneDB ID: | retro_nleu_2007 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397322.1:10887997..10888762(+) | ||
Located in intron of: | ENSNLEG00000010152 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSNLEG00000004649 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MISSCTAGKMAEQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWR |
MISSCT..KMAEQEQ.KIPLVPENLLKKRKAYQAL.ATQAKQALLAKKEQK.GKGLRFKRLESFLHDSWR | |
Retrocopy | MISSCTTRKMAEQEQGKIPLVPENLLKKRKAYQALEATQAKQALLAKKEQKEGKGLRFKRLESFLHDSWR |
Parental | QIRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKML |
Q.RDKVRLRRLEVKPHALELPDKHSLAFV..IERIDGVSL.VQRTIARL.LKKIF..VFV.VTPQNLKML | |
Retrocopy | QKRDKVRLRRLEVKPHALELPDKHSLAFVLCIERIDGVSLPVQRTIARLCLKKIFGDVFVNVTPQNLKML |
Parental | RIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQE |
.IVEPYV..GFPNLKSVRELILK.GQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAF.GKHFQE | |
Retrocopy | HIVEPYVPCGFPNLKSVRELILKHGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFSGKHFQE |
Parental | ISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN |
ISWFL.PFHLSVARHATKNRVGFLKEMGTPGYRGERINQLI.QLN | |
Retrocopy | ISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIHQLN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |