Parental gene:

RPL7L1, ENSTTRG00000006971

Aliases:None
Description:ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_838:82421..86371(+)


>ENSTTRG00000006971
ATGGCGGAGGAAGAGCCAAGAAAAAAGATCCCTTTGGTTCCAGAAAATCTCCTGAAAAAGAGGAAGGCTTATCAGGCCCT
GAAAGCCACCCAGGCAAAGCAGGCGCTTTTGCAAAGGAAGGAGCAGAGGAAAGGAAAAGAGATCAAGTTTAAGCGACTAG
AATGGTTCCTACATGATTCCTGGCGGCAACTACGTGACAAGGTGCGACTCAGACGACTAGAAGTGAAACCTCATGGCTTG
GAAGTGCCAGATAAACATTCCTTGGCCTTTGTTTTACGCATCGAAAGGATTAATGGGGTGAGTTTACTGGTGCAGAGGAC
CATCGCAAGACTTCGCCTGAGTAAGATTTTCAGTGGTGTCTTTATGCAAGTAACTCCTCGGACCATAAAAACGCTTCGTA
TAGTGGAACCTTATGTGACCTGGGGATTTCCAAATTTGAAGTCAGTTCGGGAACTCATCTTGAAACGTGGACAAGCCAAG
GTCAAGAATAAAATCATCCCTTTGACAGACAACACGGTGATTGAGGAGCACCTGGGGAAGTTTGGTGTCATTTGCTTGGA
AGACCTCATTCACGAAATTGCCTTTCCGGGGAAGAATTTTCAGGTGATCTCAGGATTCTTGCGCCCTTTCCAACTCTCAG
TAGCCCGTCACGCTACCAAGAATAGAGTGGGCTTCCTCAAGGAAGTGGGCTCACCTGGCTATCGAGGTGAACGCATCAAT
CAGCTCATCCGGCAGCTGAACTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012791 ortholog_one2one 2 retrogenes
Bos taurus ENSBTAG00000018478 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000001728 ortholog_one2many 4 retrogenes
Choloepus hoffmanni ENSCHOG00000000306 ortholog_one2one 4 retrogenes
Cavia porcellus ENSCPOG00000021189 ortholog_one2many 2 retrogenes
Dasypus novemcinctus ENSDNOG00000013485 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000003113 ortholog_one2one 1 retrogene
Erinaceus europaeus ENSEEUG00000010431 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000002419 ortholog_one2one 3 retrogenes
Felis catus ENSFCAG00000009707 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000146223 ortholog_one2one 22 retrogenes
Gorilla gorilla ENSGGOG00000009958 ortholog_one2many 15 retrogenes
Macaca mulatta ENSMMUG00000021313 ortholog_one2many 1 retrogene
Monodelphis domestica ENSMODG00000019028 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000013296 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000063888 ortholog_one2many 4 retrogenes
Nomascus leucogenys ENSNLEG00000004649 ortholog_one2one 21 retrogenes
Oryctolagus cuniculus ENSOCUG00000003844 ortholog_one2one 6 retrogenes
Otolemur garnettii ENSOGAG00000012671 ortholog_one2many 3 retrogenes
Pongo abelii ENSPPYG00000016619 ortholog_one2one 21 retrogenes
Pan troglodytes ENSPTRG00000018175 ortholog_one2one 23 retrogenes
Pteropus vampyrus ENSPVAG00000008696 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000016269 ortholog_one2many 1 retrogene
Sorex araneus ENSSARG00000005286 ortholog_one2one 2 retrogenes
Sarcophilus harrisii ENSSHAG00000011219 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000026472 ortholog_one2one 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000009841 ortholog_one2many 2 retrogenes
Tarsius syrichta ENSTSYG00000004848 ortholog_one2one 16 retrogenes
Tursiops truncatus ENSTTRG00000009074 within_species_paralog 16 retrogenes
Vicugna pacos ENSVPAG00000008894 ortholog_one2one 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_171 79.76 99.19
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2. retro_ttru_361 94.04 61.13
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3. retro_ttru_498 81.78 100.00
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4. retro_ttru_528 88.08 60.32
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5. retro_ttru_915 93.20 100.00
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6. retro_ttru_1194 77.59 96.36
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Download FASTA sequences of all ENSTTRG00000006971 retrocopies