RetrogeneDB ID: | retro_nleu_316 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397263.1:27275537..27276160(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LIN28A | ||
Ensembl ID: | ENSNLEG00000009294 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.67 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGSVSNQQFSGGCAKAAEEAPEEAPEDAARE-ADEPQLLHGAGICKWFNVRMGFGFLSMTARAGVALDPP |
.GSVS.QQF.GGCAKAAEEAPEEAPE..AR..ADE.QLLHG.GICKWFN.RMGFG.LS.TARA.VALDPP | |
Retrocopy | IGSVSTQQFAGGCAKAAEEAPEEAPEESARR<ADEVQLLHGEGICKWFNLRMGFGLLSVTARAVVALDPP |
Parental | VDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDRC |
VDVFVHQSKLH.EGFRSLKEGEA..FTFKKSAKGLESIRVT.PGG.F.IGSER.PKGKNMQKR.SK.DRC | |
Retrocopy | VDVFVHQSKLHIEGFRSLKEGEAGAFTFKKSAKGLESIRVTRPGGAFRIGSERWPKGKNMQKRKSK-DRC |
Parental | YNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCPLKAQQGPSAQGKPTYFREEEEEIHSPALLPEAQN |
YNCG.LDHHAKECK.PPQPKKCHFCQSISH..ASC.LKAQQGPSAQGKPTYF.EEEEEIHSPALLPEAQN | |
Retrocopy | YNCGSLDHHAKECKRPPQPKKCHFCQSISHTLASCLLKAQQGPSAQGKPTYFQEEEEEIHSPALLPEAQN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |