RetrogeneDB ID: | retro_pcap_105 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_649:79794..80130(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22L1 | ||
Ensembl ID: | ENSPCAG00000008704 | ||
Aliases: | None | ||
Description: | ribosomal protein L22-like 1 [Source:HGNC Symbol;Acc:27610] |
Percent Identity: | 61.06 % |
Parental protein coverage: | 93.28 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | AKRSTWKFNLDLTHPVEDGIFDSGNFEQFL--REKVKVNGKTGNLGNMVHIECFKNKITVVSEKQFSKRY |
A..STWK..L...HP..DGIFDSGNF..FL....K.KVNG...NL.N.V.IE.F.NKI.V.SEK..SKRY | |
Retrocopy | ASASTWKSSLEMRHPIKDGIFDSGNFGPFLWAKVKIKVNGRPRNLRNLVYIE*FRNKIIVISEK*LSKRY |
Parental | LKYLTKKYLKKNNLRDWLRVVASDKETYQLRYFQISQDDDGSE |
LK.LTKKY..KN.L.DWL...A..KETY.L...QISQ..DGSE | |
Retrocopy | LKSLTKKYC-KNSLCDWLHILACNKETYDLHHLQISQNEDGSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |