Parental gene:

RPL22L1, ENSPPYG00000025900

Aliases:None
Description:ribosomal protein L22-like 1 [Source:HGNC Symbol;Acc:27610]
Organism:Orangutan (Pongo abelii)
Coordinates:3:174448821..174453073(-)


>ENSPPYG00000025900
ATGGCCTACTCTCTTCCGGCAGCGCACTGGTTTCCTGGGTTACCGGCCTCGGCGCTCCTCCCGCTTTCTTTTCCGGGAGG
CGACAATCTGACGCTCTCAGCGCGTGACGCAGCACGCTTTGGTATAAATACAGACCGCGGGGCCTTAGCTTCCTCTCTGC
TCTCGCGGACGTTTCGTAAAATGGCGCCGCAGAAAGACAGGAAGCCCAAGAGGTCAACCTGGAGGTTTAATTTGGACCTT
ACTCATCCAGTAGAAGATGGAATTTTTGATTCTGGAAATTTTGAGCAATTTCTACGGGAGAAGGTTAAAGTCAATGGCAA
AACTGGAAATCTCGGGAATGTTGTTCACATTGAACGCTTCAAGAATAAAATCACAGTTGTTTCTGAGAAACAGTTCTCTA
AAAGGTATTTGAAATACCTTACCAAGAAATACCTTAAGAAGAACAATCTTCGTGATTGGCTTCGAGTGGTTGCATCTGAC
AAGGAGACCTACGAACTTCGTTACTTCCAGATTAGTCAAGATGAAGATGAATCAGAGTCGGAGGACTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .83 RPM
SRP007412_cerebellum 2 .19 RPM
SRP007412_heart 2 .56 RPM
SRP007412_kidney 2 .82 RPM
SRP007412_liver 5 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004730 ortholog_one2many 1 retrogene
Canis familiaris ENSCAFG00000014955 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000002427 ortholog_one2one 1 retrogene
Cavia porcellus ENSCPOG00000009215 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000018894 ortholog_one2one 1 retrogene
Erinaceus europaeus ENSEEUG00000011941 ortholog_one2one 5 retrogenes
Echinops telfairi ENSETEG00000010658 ortholog_one2one 9 retrogenes
Homo sapiens ENSG00000163584 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000001734 ortholog_one2one 1 retrogene
Gadus morhua ENSGMOG00000004077 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000013220 ortholog_one2one 2 retrogenes
Macropus eugenii ENSMEUG00000009484 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000023052 ortholog_one2many 2 retrogenes
Myotis lucifugus ENSMLUG00000027683 ortholog_one2many 8 retrogenes
Macaca mulatta ENSMMUG00000022881 ortholog_one2one 2 retrogenes
Mus musculus ENSMUSG00000039221 ortholog_one2one 4 retrogenes
Nomascus leucogenys ENSNLEG00000005287 ortholog_one2one 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000014962 ortholog_one2many 2 retrogenes
Otolemur garnettii ENSOGAG00000012642 ortholog_one2one 2 retrogenes
Procavia capensis ENSPCAG00000008704 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000001951 within_species_paralog 11 retrogenes
Pteropus vampyrus ENSPVAG00000011524 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000011817 ortholog_one2many 2 retrogenes
Sus scrofa ENSSSCG00000027441 ortholog_one2one 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000022972 ortholog_one2one 3 retrogenes
Tupaia belangeri ENSTBEG00000000357 ortholog_one2one 17 retrogenes
Tursiops truncatus ENSTTRG00000007035 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2524 77.87 66.48
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSPPYG00000025900 retrocopies