RetrogeneDB ID: | retro_pcap_110 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_6723:21862..22339(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL2BP | ||
Ensembl ID: | ENSPCAG00000005664 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 2 binding protein [Source:HGNC Symbol;Acc:17146] |
Percent Identity: | 75.47 % |
Parental protein coverage: | 97.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EEESFALSISSASDAEFDAVVGYLEDIIMDDEFQLLQRNFMDKYYQEFEDTEENKLTYTPIFNEYISLVE |
EEESFALS.SS.SDAEFDAVVG..ED.IMDDE.QLLQR.F.DKYYQEFEDTEENKL.Y.PIFNEY.SL.E | |
Retrocopy | EEESFALSTSSTSDAEFDAVVGNIEDVIMDDELQLLQRSFLDKYYQEFEDTEENKLNYMPIFNEYLSLIE |
Parental | KYIEEQLLERIPGFNMAAFTTTLXXXXXXXXXXXXXXXXXXXXFLAFKEMFLDYRAEKEGRGLDLSGGLV |
KYIEEQLLERIPGFNMAAFTTTL....................FLAFKEMFLDYRAEKEGRGLDLS..LV | |
Retrocopy | KYIEEQLLERIPGFNMAAFTTTLRHHKDEVTDDIFHMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSDLV |
Parental | VTPLCKSSAMPASQNNLRH |
VT.L.KSS..PASQN.LRH | |
Retrocopy | VTSLYKSSSTPASQNILRH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |