RetrogeneDB ID: | retro_pvam_991 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_21269:4751..5089(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSPVAG00000001203 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSPVAG00000009859 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 74.56 % |
Parental protein coverage: | 52.31 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | AMGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGP-RRIHTVRVRGGNKKYRALRLDVGNFSWG |
.MGIS.DNWHKR.K..GK.KP.HKK.KYELG..AANTKIGP...IHTV.V.G..KKY.ALRLD..NFSWG | |
Retrocopy | SMGISWDNWHKRCKIMGKIKPSHKKQKYELGSSAANTKIGP<HHIHTVGV*GCSKKYCALRLDMKNFSWG |
Parental | SECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQW |
SECCT.KT.IIDVV..ASNNELV.TKTLVKNC.VLIDST...QW | |
Retrocopy | SECCTCKTSIIDVVCDASNNELVCTKTLVKNCYVLIDSTLG*QW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |