RetrogeneDB ID: | retro_tbel_607 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2539:769822..770288(-) | ||
Located in intron of: | ENSTBEG00000008794 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL24 | ||
Ensembl ID: | ENSTBEG00000012044 | ||
Aliases: | None | ||
Description: | ribosomal protein L24 [Source:HGNC Symbol;Acc:10325] |
Percent Identity: | 69.23 % |
Parental protein coverage: | 99.35 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQIN-TVLYRKHKKGQSEEIQKKR |
MKV.LCSFS...IYP...R..AR...K..QFLNAKCESAFLS..N..QIN.T...R...K...EEIQKKR | |
Retrocopy | MKVKLCSFSR**IYPRCVRQ*ARVKEKNVQFLNAKCESAFLSEGNLQQINWTIFFRRKHKKEQEEIQKKR |
Parental | PRRAVKFQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEA-KKAKQASKKTAMAAAKAPTKAAPKQ |
.R.AVKFQR.IT.ASLA.IMA.RN.K.E.RKAQ.EQA.R.AKEA.KKAKQASKKT.MAAAKAP.KAAPKQ | |
Retrocopy | TRLAVKFQRVITRASLAGIMANRNPKREIRKAQ*EQALRIAKEA>KKAKQASKKTVMAAAKAPAKAAPKQ |
Parental | KIVKPVKVSAPRVGGK |
KIVK..KVSA.RV..K | |
Retrocopy | KIVKSIKVSASRVRRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |