RetrogeneDB ID: | retro_tsyr_1511 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_47185:13547..14024(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MPHOSPH6 | ||
Ensembl ID: | ENSTSYG00000001928 | ||
Aliases: | None | ||
Description: | M-phase phosphoprotein 6 [Source:HGNC Symbol;Acc:7214] |
Percent Identity: | 89.38 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAAERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKIISEEHWYLDLPELKEKESFIIEEQSFLLCEDL |
MAAE.KTKLSKNLLRMKFMQRGL.SETKKQLEEEEKKIISEEH.YLDLPELKEKESFIIEE.SFLLCEDL | |
Retrocopy | MAAEHKTKLSKNLLRMKFMQRGLYSETKKQLEEEEKKIISEEH*YLDLPELKEKESFIIEERSFLLCEDL |
Parental | LYGRMSFRGFNPEVEKLMLQMNSKNKKEEVKDEAVELDVSDEEMARRYETLVGTIGKKFARKRDHANYEE |
LYGR.SFRGFNPEVEKLMLQ.NSKNK..EVKD.AVE.DV.DEEM.RRY..LVGTIGKKFARKRDHANYEE | |
Retrocopy | LYGRISFRGFNPEVEKLMLQINSKNKR-EVKDKAVEFDVFDEEMTRRYANLVGTIGKKFARKRDHANYEE |
Parental | DENGDIKPSKAKKMFLKPQD |
DENGDIKPSKAKK..LK.QD | |
Retrocopy | DENGDIKPSKAKKILLKSQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000127 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000016498 | 5 retrocopies | |
Dipodomys ordii | ENSDORG00000011060 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000010276 | 6 retrocopies | |
Homo sapiens | ENSG00000135698 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000001405 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000000580 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000268 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000022575 | 2 retrocopies | |
Mus musculus | ENSMUSG00000031843 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000010725 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000024341 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000012532 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000007592 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000008398 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000050087 | 6 retrocopies | |
Tupaia belangeri | ENSTBEG00000013110 | 8 retrocopies | |
Tarsius syrichta | ENSTSYG00000001928 | 2 retrocopies |
retro_tsyr_1511 , retro_tsyr_906,
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