RetrogeneDB ID: | retro_tsyr_1628 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_518651:542..815(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSTSYG00000007627 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 82.42 % |
Parental protein coverage: | 70.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNK |
.R.NVLADALKSINNAEKR...QVLIR..S.VIVRFLTVMMKHG.IGEFEI.D.HRAGKIVVNLTGRLNK | |
Retrocopy | LRVNVLADALKSINNAEKRDRSQVLIRLYSRVIVRFLTVMMKHGSIGEFEIMDGHRAGKIVVNLTGRLNK |
Parental | CGVISPRFDVQLKDLEKWQNN |
.G..SPR.DVQL.DLEKWQNN | |
Retrocopy | SGMVSPRSDVQLEDLEKWQNN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |