RetrogeneDB ID: | retro_shar_619 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL856796.1:799468..799856(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSSHAG00000017293 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 70.99 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFL-TVMMKHGYIGEFEIIDDHRAGKIVVNLTGRL |
MV..NVLADALKS.N.A.K.GK..VLIR.CSKV...FL.TVM.KH.YI..F.IIDDHRAGKIV..LTG.. | |
Retrocopy | MVHRNVLADALKSMNHAVK*GKH*VLIRLCSKVTI-FL>TVMIKHSYIC*FKIIDDHRAGKIVMSLTGT* |
Parental | NKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF |
NKC..I.P.F.VQLKDLE.WQNNLL...Q.GFIVL.TS.GI.DHEEAR.KH..GKILGFFF | |
Retrocopy | NKCSIICPTFNVQLKDLEMWQNNLLLFSQTGFIVLRTSDGITDHEEARQKHMRGKILGFFF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |