RetrogeneDB ID: | retro_tsyr_318 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_7947:113693..114025(-) | ||
Located in intron of: | ENSTSYG00000006764 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LAMTOR5 | ||
Ensembl ID: | ENSTSYG00000006011 | ||
Aliases: | None | ||
Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955] |
Percent Identity: | 82.3 % |
Parental protein coverage: | 68.1 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | CGGGGRVATPGSEPVWTEDGMEATLEQHLEDTMK-NPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLA |
CG.G....T.GS.P.WTE.GME.TLEQHLEDT.K.NPS.VGV.CTDSQGLNL....TLSDEHAGVISVLA | |
Retrocopy | CGEGCNM-TLGSRPGWTEGGMEVTLEQHLEDTVKKNPSTVGVRCTDSQGLNLD*CRTLSDEHAGVISVLA |
Parental | QQAAKLTSDPTDIPVVCLESDNGNI-MIQKHDGITVAVHKMAS |
QQAAKLTSDPTDIPVVCLESDNGNI.MIQKHDGITVAV.KMAS | |
Retrocopy | QQAAKLTSDPTDIPVVCLESDNGNI<MIQKHDGITVAVYKMAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |