RetrogeneDB ID: | retro_tsyr_786 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_20061:21670..22198(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL5 | ||
Ensembl ID: | ENSTSYG00000014038 | ||
Aliases: | None | ||
Description: | ribosomal protein L5 [Source:HGNC Symbol;Acc:10360] |
Percent Identity: | 88.64 % |
Parental protein coverage: | 66.54 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | IAYARIEGDVIVCAAYAHELPKYGVKVGLTNYAAAYCT-LLLARRLLNSFGMDKTYEGQVEVTGDEYNVE |
..YARIEGDVIVCAAYAHELPKYGVKVGLTNY.AAY.T.LLLARRLLNSFGMDKTYEGQVEVTGDE.N.E | |
Retrocopy | MSYARIEGDVIVCAAYAHELPKYGVKVGLTNYPAAY*TGLLLARRLLNSFGMDKTYEGQVEVTGDEHNAE |
Parental | SVDGKAGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN |
S.DGK.GAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP...KRFPGYDSESKEF.AEVHRKHI.GQN | |
Retrocopy | SLDGKTGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPRNAKRFPGYDSESKEFHAEVHRKHITGQN |
Parental | VADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEM |
.ADYMR.LMEEDE.AYKK.FSQYIKN.VTPDMMEE. | |
Retrocopy | AADYMRSLMEEDEEAYKKRFSQYIKNRVTPDMMEEI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |