RetrogeneDB ID: | retro_ttru_344 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1939:135113..135558(+) | ||
Located in intron of: | ENSTTRG00000012811 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSTTRG00000003388 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 67.76 % |
Parental protein coverage: | 71.23 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | LRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGA |
LRLD.GNF..G.ECCT.KTR.I..VY.ASNNELV.TKTL.KNCIVL.DST...QW.ESHYALP.GRKKGA | |
Retrocopy | LRLDMGNFP*GLECCTCKTRLI-IVYSASNNELVSTKTLAKNCIVLTDSTLF*QW*ESHYALPRGRKKGA |
Parental | KLTPEEEEILNKKR-SKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELE |
KLT.EEE.ILNKKR...K........K...K.........QQGKLLACI.S.PGQCG.ADGYVLE.KELE | |
Retrocopy | KLTSEEEGILNKKR>KRKFRRNMMKGKRMPKSAAFW--RLQQGKLLACIVSKPGQCGQADGYVLECKELE |
Parental | FYLRKIKARKGK |
F.LRKI.ARK.K | |
Retrocopy | F*LRKINARKSK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |