RetrogeneDB ID: | retro_chof_2633 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_92720:3705..4113(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSCHOG00000008785 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 73.19 % |
Parental protein coverage: | 98.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LSSQRLTMGITLDNRHKRRKTGGKRKPYLKKR-KYELGIPSANTXXXXXXXXXXGVRGGNRKYRALKWDV |
LSSQR.TMGI...N.HK..KTG.KRKPY.KK..KYELG.P.ANT...........VRGG..KYRAL..DV | |
Retrocopy | LSSQRWTMGISWGNWHKHHKTGDKRKPYHKKQ<KYELGHPAANTKIGPHHIHTVQVRGGIKKYRALRLDV |
Parental | EDFSWGSECCTRKT-RIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKL |
..FSWGSECCT.KT.RIIDVVYNASNNELVR.KTLVKNCIVLIDST.YRQWYES.YAL.LG.KKGAKL | |
Retrocopy | RSFSWGSECCTHKT>RIIDVVYNASNNELVRPKTLVKNCIVLIDSTLYRQWYESYYALHLGCKKGAKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |