miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|108859159|gb|EC313182.1|EC313182 GCTTGCCTAGACGAGACACAGTGCATAAAAACTTGATGGCTTTTGGGGGACAGGTATGTTTTTCTTGCAGCTGCGGTTGT
AAGGTCTTGGCAAGACAAGCAGTGAGGCCCGAATTTTGAACTTCTGATGAGTGTGTAATACGAAGGACCATGTACATTTT
TGCTTAAAGGTCCTCAAATGAACACATGAAGAGGTTGCTGTGAACTTTAGTGGCCCTACTGCGCAGAAGCATTCAGATGT
CACTTGATGATCTGTAAGGGAACTTGCTGAGTTGGGAATGAACTAGTGAATATGAATGCACATTCCTTGTGGTAGGTTAT
CACTGGGTGGGTGGCAAGATTTAATAGAGATGGAGTGTGCATTTAATTTTTTTTACCCACTGGTATTCCTGCAGAAGTGG
ATAATCATTTTAACAATATTCTTTTCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGGTCTGGCT
GTTGTGGTGTGCAAAACTTCCTATGTTGCTTTTTTGCCACACTGCAACACTTTACAGATGTGGAAGATGTGAAATTTGTC
ATCAATTATGACTACCCTAACTCTTCAGAGGATTATATCCACCGAATTGGACGAACTGCCCGTAGTACCAAAACAGGCAC
AGCATACACTTTCTTTACACCTAATAACATAAAACAAGTAAGCGACCTCATCTCTGTGCTTCGGGAGGCTAATCAAGCAA
TCAATCCCAAATTGCNNCAGTTAATTGAAGACAGNNGT




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  144 bits (362), Expect = 8e-34
 Identities = 70/72 (97%), Positives = 71/72 (98%)
 Frame = +3

Query: 537 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 716
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 717 AINPKLXQLIED 752
           AINPKL QL+ED
Sbjct: 466 AINPKLLQLVED 477