miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|108923792|gb|EC352729.1|EC352729 GGGGGCTTCCTCCTGGAGAAGCTGGAGAAAACTGACTTGGGTGTCCTTGGCTTCTGAAGGGAAGAGAAGTCAGGGCTGGA
GAAGAAGGGGGTGCTTCTGAAGAAACAGGCCCAGGAAGATGTCCAAAGTGTTCCGGGTCCTTTTCCGGCTCCTGTTGCTG
TTAGGTGGGGTGGCTTCTGTGACATTTCAACATCATCGTTATGATGATCTCATTCGGACCTTATACAAGGTTCACAATGA
GTGCCCCCACATCACTAGAGTTTACAGCATTGGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAATTCAGTGACT
TCCCTGGAATGCATGAGCTCTTGGAGCCAGAATTTAAGTATATTGGAAACATGCATGGGAATGAAGTTCTGGGGAGAGAG
CTGCTGATCCAACTCTGTGAGTTCCTGTGCGAAGAGTACCGCCAGAGGAATGAACGCATCATCCGGCTGATTCACAACAC
AAGGATTCACATCCTGCCTTCCATGAACCCGGATGGTTATGAAGTAGCTGCAGAACAGGGCCCAGATGCCAATGGGTATC
TTACTGGCCGGAACAATGCCAATGGAGTAGACCTAAACCGAAACTTTCCGGATCTTAACACCTACATGTACTACAATGAG
AAGAGTGGGGGGCCCAACCACCACATACCCCTTCCAGACAACTGGAGAAATCACGTGGAACCAGAGACTGAGCTGTTATA
CAGTGNNTGGAATCCATCAACTTTGTTCTTNNGCCATCTTCATGGAGGTGCAGTTGTAGCCAATTACCCGTATGACAAGT
CCGTNAGNATCGGGTCGGGT




Most similar to sp|Q2KJ83|CBPN_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q2KJ83|CBPN_BOVIN Carboxypeptidase N catalytic chain OS=Bos
           taurus GN=CPN1 PE=2 SV=1
          Length = 462

 Score =  352 bits (902), Expect = 2e-96
 Identities = 166/215 (77%), Positives = 187/215 (86%), Gaps = 3/215 (1%)
 Frame = +2

Query: 170 VASVTFQHHRYDDLIRTLYKVHNECPHITRVYSIGRSVKGRHLYALEFSDFPGMHELLEP 349
           VA VTF+HHRYDDL+R LYKVHNECPHITRVYSIGRSVKGRHLY LEFSD+PG+HE LEP
Sbjct: 17  VAPVTFRHHRYDDLVRMLYKVHNECPHITRVYSIGRSVKGRHLYVLEFSDYPGIHEPLEP 76

Query: 350 EFKYIGNMHGNEVLGRELLIQLCEFLCEEYRQRNERIIRLIHNTRIHILPSMNPDGYEV- 526
           E KY+GNMHGNEVLGRELL+QL EFLCEE+R RN+RI+RL+ +TRIHI+PSMNPDGYEV 
Sbjct: 77  EVKYVGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRIVRLVEDTRIHIMPSMNPDGYEVA 136

Query: 527 AAEQGPDANGYLTGRNNANGVDLNRNFPDLNTYMYYNEKSGGPNHHIPLPDNWRNHVEPE 706
           AA Q  D +GYL GRNNANGVDLNRNFPDLNTY+YYNEK+GGPNHH PLPDNW++ VEPE
Sbjct: 137 AAAQERDISGYLVGRNNANGVDLNRNFPDLNTYIYYNEKNGGPNHHFPLPDNWKSQVEPE 196

Query: 707 TELLYSXWNPSTLF--XXHLHGGAVVANYPYDKSV 805
           T+ +   W  S  F    +LHGGAVVANYPYDKS+
Sbjct: 197 TQAVIQ-WIRSFNFVLSANLHGGAVVANYPYDKSL 230