miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|108925613|gb|EC354408.1|EC354408 GGAGTAGGGCTGGGGCTTCCTCCTGGAGAAGCTGGAGAAAACTGACTTGGGTGTCCTTGGCTTCTGAAGGGAAGAGAAGT
CAGGGCTGGAGAAGAAGGGGGTGCTTCTGAAGAAACAGGCCCAGGAAGATGTCCAAAGTGTTCCGGGTCCTTTTCCGGCT
CCTGTTGCTGTTAGGTGGGGTGGCTTCTGTGACATTTCAACATCATCGTTATGATGATCTCATTCGGACCTTATACAAGG
TTCACAATGAGTGCCCCCACATCACTAGAGTTTACAGCATTGGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAA
TTCAGTGACTTCCCTGGAATGCATGAGCTCTTGGAGCCAGAATTTAAGTATATTGGAAACATGCATGGGAATGAAGTTCT
GGGGAGAGAGCTGCTGATCCAACTCTGTGAGTTCCTGTGCGAAGAGTACCGCCAGAGGAATGAACGCATCATCCGGCTGA
TTCACAACACAAGGATTCACATCCTGCCTTCCATGAACCCGGATGGTTATGAAGTAGCTGCAGAACAGGGCCCAGATGCC
AATGGGTATCTTACTGGCCGGAACAATGCCAATGGAGTAGACCTAAACCGAAACTTTCCGGATCTTAACACCTACATGTA
CTACAATGAGANNAGTGGGGGGCCCAACCACCACATACCCCTTCCAGACAACTNNAGNNATCAGGTGGAACCAGAGACTG
AGGCTGTTATACAGTGGATNNNATCCATCAACTTTGTTC




Most similar to sp|Q9JJN5|CBPN_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9JJN5|CBPN_MOUSE Carboxypeptidase N catalytic chain OS=Mus
           musculus GN=Cpn1 PE=2 SV=1
          Length = 457

 Score =  337 bits (863), Expect = 7e-92
 Identities = 153/193 (79%), Positives = 172/193 (89%)
 Frame = +3

Query: 180 VASVTFQHHRYDDLIRTLYKVHNECPHITRVYSIGRSVKGRHLYALEFSDFPGMHELLEP 359
           V  VTF+HHRYDDL+RTLYKVHN+CP ITR+Y+IGRSVKGR+LY LEFSD+PG+HE LEP
Sbjct: 18  VTPVTFRHHRYDDLVRTLYKVHNQCPDITRLYNIGRSVKGRYLYVLEFSDYPGIHEPLEP 77

Query: 360 EFKYIGNMHGNEVLGRELLIQLCEFLCEEYRQRNERIIRLIHNTRIHILPSMNPDGYEVA 539
           E KY+GNMHGNEVLGRELL+QL EFLCEE+R RN+RI+RLI +TRIHILPSMNPDGYEVA
Sbjct: 78  EVKYVGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRILRLIQDTRIHILPSMNPDGYEVA 137

Query: 540 AEQGPDANGYLTGRNNANGVDLNRNFPDLNTYMYYNEXSGGPNHHIPLPDNXXXQVEPET 719
           A QGP+ +GYL GRNNANGVDLNRNFPDLNTY YYN  +GGPNHH+PLPDN   QVEPET
Sbjct: 138 AAQGPNMSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKNGGPNHHLPLPDNWKSQVEPET 197

Query: 720 EAVIQWXXSINFV 758
            AVIQW  S+NFV
Sbjct: 198 RAVIQWIRSLNFV 210