miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|108928130|gb|EC356831.1|EC356831 GGAGTAGGGCTGGGGCTTCCTCCTGGAGAAGCTGGAGAAAACTGACTTGGGTGTCCTTGGTTTCTGAAGGGAAGAGAAGT
CAGGGCTGGAGAAGAAGGGGGTGCTTCTGAAGAAACAGGCCCAGGAAGATGTCCAAAGTGTTCCGGGTCCTTTTCCGGCT
CCTGTTGCTGTTAGGTGGGGTGGCTTCTGTGACATTTCAACATCATCGTTATGATGATCTCATTCGGACCTTATACAAGG
TTCACAATGAGTGCCCCCACATCACTAGAGTTTACAGCATTGGGCGCAGCGTCAAGGGAAGACATCTGTATGCCCTGGAA
TTCAGTGACTTCCCTGGAATGCATGAGCTCTTGGAGCCAGAATTTAAGTATATTGGAAACATGCATGGGAATGAAGTTCT
GGGGAGAGAGCTGCTGATCCAACTCTGTGAGTTCCTGTGCGAAGAGTACCGCCAGAGGAATGAACGCATCGTCCGGCTGA
TTCACAACACAAGGATTCACATCCTGCCTTCCATGAACCCGGATGGTTATGAAGTAGCTGCAGAACAGGGCCCAGATGCC
AATGGGTATCTTACTGGCCGGAACAATGCCAATGGAGTAGACCTAAACCGAAACTTTCCGGATCTTAACACCTACATGTA
CTACAATGAGAAGAGTGAGGGGCCCAACCACCACATACCCCTTCCAGACAACTGGAGAAATCNNGTGGAACCAGAGACTG
AGCTGTTATACAGTGGATGGAATCCATCAACTTTGTCTTCTGCCATCTTCATGGAGTGCAGTTGTAGCCAATACCCGTAT
GACAGTCCGTGAGCATCGNNTCGGGNTCCGTCGTACTGCTGATACTCCNNCTC




Most similar to sp|Q2KJ83|CBPN_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q2KJ83|CBPN_BOVIN Carboxypeptidase N catalytic chain OS=Bos
           taurus GN=CPN1 PE=2 SV=1
          Length = 462

 Score =  327 bits (838), Expect = 6e-89
 Identities = 156/212 (73%), Positives = 177/212 (83%), Gaps = 4/212 (1%)
 Frame = +3

Query: 180 VASVTFQHHRYDDLIRTLYKVHNECPHITRVYSIGRSVKGRHLYALEFSDFPGMHELLEP 359
           VA VTF+HHRYDDL+R LYKVHNECPHITRVYSIGRSVKGRHLY LEFSD+PG+HE LEP
Sbjct: 17  VAPVTFRHHRYDDLVRMLYKVHNECPHITRVYSIGRSVKGRHLYVLEFSDYPGIHEPLEP 76

Query: 360 EFKYIGNMHGNEVLGRELLIQLCEFLCEEYRQRNERIVRLIHNTRIHILPSMNPDGYEV- 536
           E KY+GNMHGNEVLGRELL+QL EFLCEE+R RN+RIVRL+ +TRIHI+PSMNPDGYEV 
Sbjct: 77  EVKYVGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRIVRLVEDTRIHIMPSMNPDGYEVA 136

Query: 537 AAEQGPDANGYLTGRNNANGVDLNRNFPDLNTYMYYNEKSEGPNHHIPLPDNWRNXVEPE 716
           AA Q  D +GYL GRNNANGVDLNRNFPDLNTY+YYNEK+ GPNHH PLPDNW++ VEPE
Sbjct: 137 AAAQERDISGYLVGRNNANGVDLNRNFPDLNTYIYYNEKNGGPNHHFPLPDNWKSQVEPE 196

Query: 717 TELLYSGWNPS---TLSSAIFMECSCSQYPYD 803
           T+ +   W  S    LS+ +      + YPYD
Sbjct: 197 TQAVIQ-WIRSFNFVLSANLHGGAVVANYPYD 227