miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|108930569|gb|EC359270.1|EC359270 GGACTCTCACGGATTCTTGGGTAGTGTTACAGCTCTTTTAGAATTTGTCTAGTAGGTTTTCCGGTTTTTGCCGGGAAGCC
CTTATTTTGTGTTTATGAAAAAAAAGTACTCCAACTAAATGAAAGCGAGAGAAAACTTGTTTGTTGTTACTCCGCCGGGC
TCGAGGGTAGAAGCTCTGTTTATTTTTGCTTCCGCCCTGCAAGCCCGGTAGCTGGTAACAAATTTGAAGAAAACAGATCC
TGGATGCTAACGCGCAGCTTCCGGGATTAGGAAGCAGCTTCCTTCTCTGAGCGTGACGAGCGCGGCTCTCAGAAGCCCTA
CATAAGTCGGCTACCTTGCTAAGTATTCCATGGCGTCGGGCCCCGCGCAACCCGCGGCCTTGAGCGCTGAACAGGCTAAG
GTGGTCCTTGCTGAGGTCATCCAGGCGTTCGCGGTCCCGGAGAACGCGGTGCGCATGGAAGAGGCTCGGGACAATGCTTG
CAACGACATGGGCAAGATGCTGCAGTTCGTGCTTCCTGTGGCCACGCAGATCCAGCAGGAGGTTCTCAAAGCCTACGGCT
TCAGCTGCGATGGGGAAGGCGTCCTGAAGTTTGCCAGACTGGTGAAGTCCTATGAGCTCAGATCCTGAGATCGCCAGCTT
GTCTGGAAAGTTGAAGCCCTGTTTCTGCCGCCATGACGCTGCCTCCCATGGGCCTGGATANNGGTAGCGTNNAGCTCCTG
AGGAGTACCGGCCATCATGACACGCGGGAGGAGATGTGCCATCATCTGGAACTCTTGTACACTTGCTGTCANGGAGGAAA
NAANNTTGCTGACGCT




Most similar to sp|O35127|C10_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O35127|C10_MOUSE Protein C10 OS=Mus musculus GN=Grcc10 PE=2 SV=1
          Length = 126

 Score =  174 bits (440), Expect = 9e-43
 Identities = 91/109 (83%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
 Frame = +2

Query: 350 MASGPAQPAALSAEQAKVVLAEVIQAFAVPENAVRMEEARDNACNDMGKMLQFVLPVATQ 529
           MAS  AQPAALSAEQAKVVLAEVIQAF+ PENAVRM+EARDNACNDMGKMLQFVLPVATQ
Sbjct: 1   MASASAQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQ 60

Query: 530 IQQEVLKAYGFSCDGEGVLKFARLVKSYELRS*D-RQLVWKVEALFLPP 673
           IQQEV+KAYGFSCDGEGVLKFARLVKSYE +  +   L  K++ALFLPP
Sbjct: 61  IQQEVIKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPP 109