miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|109182839|gb|EC381843.1|EC381843 CGACTTAACGCGTTAGCTCCGGAAGCCATGCCTCAAGGGCACAACCTCCAAGTCGACCCACGCGTCCGTCAGCACTGACC
CGGCAGCCTGCTGCTCAAGTCCGGCAGCAGTGACAAGCAACAAGCAACAGGCAACAAGCAACGGGCAACAATGTCTCAGA
AGCCGAACTACAAAGTTGCGGACATTTCTCTGGCGGAGTGGGGACGCAAGGCCCTCGACATCGCTGAGAATGAGATGCCG
GGCCTTATGAAGATGCGCCAGATGTACGGCAAGTCCAAGCCGCTGACCGGCGCCCGCATCTCTGGCTGCCTCCACATGAC
GGTGCAGACGGCCGTTCTAATCGAGACGCTTGTGGAGCTGGGTGCCAAGGTGATGTGGTCGAGCTGCAACATCTTCTCCA
CGCAGGACCACGCCGCCGCTGCCATCGCCAAGGCCGGCATCCCTGTGTTCGCGTGGAAGGGCGAGACGGACGAGGAGTAC
GTGTGGTGCATCGAGCAGACGCTCATTTTCCCCGACGGGAAGCCGCTCAACATGATCCTGGACGATGGAGGGGACCTCAC
CAACCTCGTGCACACAAAGCACCCCGAACTGCTGAAAGGCATTCGCGGCGTGTCTGAGGAGACGACCACGGGCGTGCACA
ACCTCTACAAGATGCTCAAGAACAATGAGCTCAAGATCCCAGCCATCA




Most similar to sp|O93477|SAHHB_XENLA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O93477|SAHHB_XENLA Adenosylhomocysteinase B OS=Xenopus laevis
           GN=ahcy-b PE=2 SV=1
          Length = 433

 Score =  296 bits (757), Expect = 1e-79
 Identities = 137/179 (76%), Positives = 158/179 (88%)
 Frame = +1

Query: 151 MSQKPNYKVADISLAEWGRKALDIAENEMPGLMKMRQMYGKSKPLTGARISGCLHMTVQT 330
           MS K +YKVADISLA+WGRKA++IAENEMPGLMKMR+MY +SKPL GARI+GCLHMT+QT
Sbjct: 1   MSDKLSYKVADISLADWGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQT 60

Query: 331 AVLIETLVELGAKVMWSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYVWCIEQTLIF 510
           AVLIETL  +GA+V WSSCNIFSTQDH        G+PV+AWKGETDEEY+WCIEQT+ F
Sbjct: 61  AVLIETLTAIGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYF 120

Query: 511 PDGKPLNMILDDGGDLTNLVHTKHPELLKGIRGVSEETTTGVHNLYKMLKNNELKIPAI 687
            DGKPLNMILDDGGDLTNLVHTK+P+LLKGI+G+SEETTTGVHNLYKM  +  L++PAI
Sbjct: 121 KDGKPLNMILDDGGDLTNLVHTKYPQLLKGIKGISEETTTGVHNLYKMKSSGTLQVPAI 179