miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|114443910|gb|EE756794.1|EE756794 CTGTAAGGGGACTTGCTAATTTGGGAATGTTAGGAAATACACACGTCCTTTTGACACGCTCCATCATTGGGTGGGTAATA
AGGTATACAGATGACGTGTGCTTTTTCTTTGTTTTTTTTCTTCCCCACTTTCAACCTCAATGGTATTCCTACAGGGAATG
GATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGGTCTGGC
TGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTGAAATTTGT
CATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCA
CAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGGGAAGCTAATCAAGCA
ATTAATCCTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGATCCAGGGGTAGAGGAGGCATGAAGGATGACCG
GCGGGACAGATACTCTGCGGGCAAAAGGGGTGGATTTAATACATTTAGAGACAGGGAAAATTATGACCGCGGTTACTCTA
GTCTGCTTAAGAGAGATTTTGGG




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  201 bits (510), Expect = 5e-51
 Identities = 102/122 (83%), Positives = 102/122 (83%)
 Frame = +1

Query: 298 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 477
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 478 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGYSSLLKRD 657
           AINPKLLQLVE                    YSAGKRGGFNTFRDRENYDRGYSSLLKRD
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRD 525

Query: 658 FG 663
           FG
Sbjct: 526 FG 527