miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|114470613|gb|EE782981.1|EE782981 CTTCCCTCGACCGAGGCGCTCAGCCCTGCAGCCATGCTGAGGCTGGCTCTCACCGTCAGGCTGTTGCAAGCCCCGCCGGG
GGGTTGGGTGGTCCCTAAGGCGCACATCACTGCCAAGCCAGCCAAAACACCCACTTCTCCCAAGGAGCAGGCCATCGCGC
TCTCTGCGACATTCCTCAGCTTCCTGCTTCCTGCTGGCTGGGTCCTGTACCACCTGGATCACTACAAGAAGAGCTCAGCA
GCATGAAGGCTCTGCGGTCGCCACACCAGGCACAGACAGGAAGATCAGATTAAAGCCCTCCTCTTTCCTCACGTCTCTGG
TGATTCTCTGTATGCGCATCGTGCACCTCCCCCACTCCCCCTGGATGCCCAGGACTGGGCTGTCGGACCCACCCTGGGCT
GATAGGCTGGCTCCTGTCAGCATCGGGGTACTCAGGTCACAGAAGCTGCTGGCTCGGTGGCAATGGGTGGACACACGTTA
GAAGGAAACAGACACCACGTCTCCCTGAGCAACAATACAGGCAGGACTCGCTTCCTTGGCTGCTGCGCCCACCACCCTCT
GTTCTGGCTCTGCCCCATGGCCAGTGTGGTCAGGGATGCCTTCTCCTAGACGGTGAGAACCAAAGCCAATTTCCACCAGG
TTCCACCTCCTGCTTTTTACCACTTCAGGCACACGCTTAACCTGGGAGCTAAGCCTAAGGAACAGAACACAACAGGACTG
CGCAGGCATTTATTACAGAAACGTCCTCAAGCTGCTCTTGAGAACCATTCACGCGTGTGGGGTGCAGTGGGG




Most similar to sp|P10175|COX8B_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P10175|COX8B_BOVIN Cytochrome c oxidase subunit 8B,
           mitochondrial OS=Bos taurus GN=COX8B PE=1 SV=3
          Length = 70

 Score =  127 bits (318), Expect = 1e-28
 Identities = 63/70 (90%), Positives = 64/70 (91%)
 Frame = +1

Query: 34  MLRLALTVRLLQAPPGGWVVPKAHITAKPAKTPTSPKEQAIALSATFLSFLLPAGWVLYH 213
           MLRLA TVRLLQAP  GW VPKAHITAKPAKTPTSPKEQAI LS TFLSFLLPAGWVLYH
Sbjct: 1   MLRLAPTVRLLQAPLRGWAVPKAHITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYH 60

Query: 214 LDHYKKSSAA 243
           LD+YKKSSAA
Sbjct: 61  LDNYKKSSAA 70