miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|116836117|gb|EG596113.1|EG596113 CTAGAGAAGGAACAACTTCTCACACTTAGTCAGTGGGAAAGGAAAGCAGTGCTTTGAAAGTTCCTCCCTCACCTACACAG
TAGTCGTCATGTCGAGACCTGCCAGAGAGAGACACATTCTCAAGTGAATCCTGGCTTCTTGGAAGCGCTTGCAGCTGCGG
TTGTAAGGTCTTGGCAAGACAAGCAGTGAGGCCCGAATTTTGAACTTCTGATGAGTGTGTAATACGAAGGACCATGTACA
TTTTTGCTTAAAGGTCCTCAAATGAACACATGAAGAGGTTGCTGCGAACTTTAGTGGCCCTACTGCGCAGAAGCATTCAG
ATGTCACTTGATGATCTGTAAGGGAACTTGCTGAGTTGGGAATGAACTAGTGAATATGAATGCACATTCCTTGTGGTAGG
TTATCACTGGGTGGGTGGCAAGATTTAATAGAGATGGAGTGTGCATTTAATTTTTTTACCTCACTGGTATTCCTGCAGAA
GTGGATAATCATTTTAACAATATTCTTTTCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGGTCT
GGCTGTTGTGGTGTGCAAAACTTCCTATGTTGCTTTTTTGCCACACTGCAACACTTTACAGATGTGGAAGATGTGAAATT
TGTCATCAATTATGACTACCCTAACTCTTCAGAGGATTATATCCACCGAATTGGACGAACTGCCCGTAGTACCAAAACNN
GCACAGCATACACTTTCTTTACACCTAATAACATNAAACAAGTAAGCGACCTCATCTCTGTGCTTCGGGAGGCTAATCAA
GCAATCAATCCCNNATTGCTTCAGTTAATTGAAGACAGNGTTCAGTCGTT




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  139 bits (349), Expect = 3e-32
 Identities = 68/72 (94%), Positives = 69/72 (95%)
 Frame = +3

Query: 621 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTXTAYTFFTPNNXKQVSDLISVLREANQ 800
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKT TAYTFFTPNN KQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 801 AINPXLLQLIED 836
           AINP LLQL+ED
Sbjct: 466 AINPKLLQLVED 477