miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|117730671|gb|DB588482.1|DB588482 TGCATGGAATAATGGAATAGGACCTCGGTTCTATTTTGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACG
GGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAA
TGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCGAAGACGATCAGATACCGTCCTAGTTCTGACTATAAACGATAGGA
GTCGTTTCAATTAACGCTAAGTCTCAAAGTTTTACTATTTTGTTCTGCTGAAAGTGTTAAGATAAAGAAAATGTCCAGTT
CTATCAACGAATTGTGTAAGGCCAATGTATTCCACTCGCCGAATATCAAGGCCCTGTGTCAAGAATCGAATATAAATCGC
GACGCTCTTGCTGAAACACAAGTTACGAGAAGAATAGCCGCTGCAACCACGGAAGAGACCAGCTGCGAATTTGGATCTGG
TAAATACTATGCGCTTTGTGGTCTCGGTGGAATTCTGAGTTGCGGTGTAACCCATACCGCACTGGTTCCTTTGGATCTGG
TGAAATGCAGAATACAAGTCGAACCAGAAAAGTACAAAAACATCCTCCAGGGTTTCAAGTTATCAGTCAAAGAGGAAGGC
ATTAGAGGTCTCGGAAAAGGATGGTCGCCAACTTTAATTGGTTACTCCATGCAGGGGTTATGCAAGTTTGGATTTTATGA
AGT




Most similar to sp|Q8VEM8|MPCP_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8VEM8|MPCP_MOUSE Phosphate carrier protein, mitochondrial
           OS=Mus musculus GN=Slc25a3 PE=1 SV=1
          Length = 357

 Score =  172 bits (435), Expect = 3e-42
 Identities = 79/137 (57%), Positives = 103/137 (75%)
 Frame = +2

Query: 311 MSSSINELCKANVFHSPNIKALCQESNINRDALAETQVTRRIXXXXXXXXSCEFGSGKYY 490
           M SS+  L +AN F++P+++ +    +  R   A  + +R +        SCEFGS KYY
Sbjct: 1   MFSSVAHLARANPFNAPHLQLVHDGLSGPRSPPAPPRRSRHLAAAAVEEYSCEFGSMKYY 60

Query: 491 ALCGLGGILSCGVTHTALVPLDLVKCRIQVEPEKYKNILQGFKLSVKEEGIRGLGKGWSP 670
           ALCG GG+LSCG+THTA+VPLDLVKCR+QV+P+KYK I  GF +++KE+G+RGL KGW+P
Sbjct: 61  ALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAP 120

Query: 671 TLIGYSMQGLCKFGFYE 721
           TLIGYSMQGLCKFGFYE
Sbjct: 121 TLIGYSMQGLCKFGFYE 137